1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' |
...tagatagctttgtgatgattagtaagtaccagtatcagctggactggatactcggacatctgggcatggcttacgtctgggcagcctggtggttgtgcagGGACGAGATTCTTATGCTGGAAACTCCGGAAGAAATCCTAGTTCCTCTCGAAATTCGAAAGAGTGAGCACATTGGTTGAACTGGGTCCTGCATCTTGTTC
species | Physcomitrella patens |
transcript | PP1S182_90V6.1 |
intron # | 13 |
splice site | 3' |
intron type | U2 |
EST: CAGGAATGCAGAGGAGCTCTCCGGTGGCATCTACGGATCCCAAGCGGACG GGACGAGATTCTTATGCTGGAAACTCCGGAAGAAATCCTAGTTCCTCTCGAEST: gi|67699341|gb|BJ959574.1|BJ959574
genomic: CAGGAATGCAGAGGAGCTCTCCGGTGGCATCTACGGATCCCAAGCGGACGgtatctaacc ... ggttgtgcagGGACGAGATTCTTATGCTGGAAACTCCGGAAGAAATCCTAGTTCCTCTCGA
EST: CAGGAATGCAGAGGAGCTCTCCGGTGGCATCTACGGATCCCAAGCGGACG GGACGAGATTCTTATGCTGGAAACTCCGGAAGAAATCCTAGTTCCTCTCGAEST: gi|18337099|gb|BJ169123.1|BJ169123
genomic: CAGGAATGCAGAGGAGCTCTCCGGTGGCATCTACGGATCCCAAGCGGACGgtatctaacc ... ggttgtgcagGGACGAGATTCTTATGCTGGAAACTCCGGAAGAAATCCTAGTTCCTCTCGA
EST: CAGGAATGCAGAGGAGCTCTCCGGTGGCATCTACGGATCCCAAGCGGACG GGACGAGATTCTTATGCTGGAAACTCCGGAAGAAATCCTAGTTCCTCTCGA
genomic: CAGGAATGCAGAGGAGCTCTCCGGTGGCATCTACGGATCCCAAGCGGACGgtatctaacc ... ggttgtgcagGGACGAGATTCTTATGCTGGAAACTCCGGAAGAAATCCTAGTTCCTCTCGA
ggatactcggacatctgggcatggcttacgtctgggcagcctggtggttgtgcagGGACGAGATTCTTATGCTGGAAACTCCGGAAGAAATCCTAGTTCCTCTCGAAATTCGAAAGAGTGAGCACATTGGTTGAACTGGGTCCTGCATCTTGTTC
ggcttac putative branch site (score: 17)