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gtctgtatatactccctttccggtttttttgctattagtacacaattactatttgacattgatgttcaatttccactgaagatattcatatctgatcacttgtgccgtgggattaacgccaacttgaaattcagGCAAATGTTGCCAAGTTTGAAGGGCACACAGGACCCGTGACGGATATATCTTTCTCTGAGAACGGTTACTTTTTGGCT
species | Physcomitrella patens |
transcript | PP1S14_250V6.2 |
intron # | 13 |
splice site | 3' |
intron type | U2 |
EST: ACTACTGNATCACTGG-TCGCATTTGGGATGTGAAATCTCAG GCAAATGTTGCCAAGTTTGAAGGGCACACAGGACCCGTGACGGATATATCTEST: gi|162238755|gb|FC419053.1|FC419053
genomic: ACTACTGAATCACTGGTTCGCATTTGGGATGTGAAATCTCAGgtctgtatat ... tgaaattcagGCAAATGTTGCCAAGTTTGAAGGGCACACAGGACCCGTGACGGATATATCT
EST: GGACTGGAACTACTGAATCACTGGTTCGCATTTGGGATGTGAAATCTCAG GCAAATGTTGCCAAGTTTGAAGGGCACACAGGACCCGTGACGGATATATCTEST: gi|6102231|gb|AW126701.1|AW126701
genomic: GGACTGGAACTACTGAATCACTGGTTCGCATTTGGGATGTGAAATCTCAGgtctgtatat ... tgaaattcagGCAAATGTTGCCAAGTTTGAAGGGCACACAGGACCCGTGACGGATATATCT
EST: TGAAAT-TCAG GCAAATGTTGCCAAGTTTGAAGGGCACACAGGACCCGTGACGGATATATCTEST: gi|19787424|gb|BQ040623.1|BQ040623
genomic: TGAAATCTCAGgtctgtatat ... tgaaattcagGCAAATGTTGCCAAGTTTGAAGGGCACACAGGACCCGTGACGGATATATCT
EST: TGAAAT-TCAG GCAAATGTTGCCAAGTTTGAAGGGCACACAGGACCCGTGACGGATATATCTEST: gi|100381276|gb|BY950059.1|BY950059
genomic: TGAAATCTCAGgtctgtatat ... tgaaattcagGCAAATGTTGCCAAGTTTGAAGGGCACACAGGACCCGTGACGGATATATCT
EST: GGACTGGAACTACTGAATCACTGGTTCGCATTTTGGATGTGAAATCTCAG GCAAATGTTGCCAAGTTEST: gi|162182529|gb|FC357504.1|FC357504
genomic: GGACTGGAACTACTGAATCACTGGTTCGCATTTGGGATGTGAAATCTCAGgtctgtatat ... tgaaattcagGCAAATGTTGCCAAGTT
EST: GGACTGGAACTACTGAATCACTGGTTCGCATTTGGGATGTGAAATCTCAG GCAAATGTTGCCAAGTTTGAAGGGCACACAGGACCCGTGACGGATATATCT
genomic: GGACTGGAACTACTGAATCACTGGTTCGCATTTGGGATGTGAAATCTCAGgtctgtatat ... tgaaattcagGCAAATGTTGCCAAGTTTGAAGGGCACACAGGACCCGTGACGGATATATCT
agatattcatatctgatcacttgtgccgtgggattaacgccaacttgaaattcagGCAAATGTTGCCAAGTTTGAAGGGCACACAGGACCCGTGACGGATATATCTTTCTCTGAGAACGGTTACTTTTTGGCT
gattaac putative branch site (score: 2)
ttgaaatt TA-rich tract