1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' |
...tgcgtgggttatttctcagaaacataacccaaaagggttttgttgtcaccattatggaggagcaggttaagctgacttgctcactttcttgagtctgcagGAAGGGTGGACACCTCTTCACATAGCTGTCCAAAGTGGGCGATTAGATATTATCAAGTTTCTTCTTACAAGGGGTGCTGACACTAGGATAAAAAACAAG
species | Physcomitrella patens |
transcript | PP1S9_314V6.1 |
intron # | 12 |
splice site | 3' |
intron type | U2 |
EST: CCATGAAAGCTGTGCTGCGACGACATGCTGACGTCAACGCATGTGACAAT TEST: gi|162171277|gb|FC347215.1|FC347215
genomic: CCATGAAAGCTGTGCTGCGACGACATGCTGACGTCAACGCATGTGACAATgtgagctcct ... gagtctgcag-
EST: CCATGAAAGCTGTGCTGCGACGACATGCTGACGTCAACGCATGTGACAAT TEST: gi|162171277|gb|FC347215.1|FC347215
genomic: CCATGAAAGCTGTGCTGCGACGACATGCTGACGTCAACGCATGTGACAATgtgagctcct ... gagtctgcag-
EST: CCATGAAAGCTGTGCTGCGACGACATGCTGACGTCAACGCATGTGACAAT TEST: gi|162171277|gb|FC347215.1|FC347215
genomic: CCATGAAAGCTGTGCTGCGACGACATGCTGACGTCAACGCATGTGACAATgtgagctcct ... gagtctgcag-
EST: CCATGAAAGCTGTGCTGCGACGACATGCTGACGTCAACGCATGTGACAAT T
genomic: CCATGAAAGCTGTGCTGCGACGACATGCTGACGTCAACGCATGTGACAATgtgagctcct ... gagtctgcag-
tcaccattatggaggagcaggttaagctgacttgctcactttcttgagtctgcagGAAGGGTGGACACCTCTTCACATAGCTGTCCAAAGTGGGCGATTAGATATTATCAAGTTTCTTCTTACAAGGGGTGCTGACACTAGGATAAAAAACAAG
tgctcac putative branch site (score: 7)
ctttcttg CT-rich tract
attat TA-rich tract