1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' |
gttactttcgattcctactcatctgcccttccagaacctactactgtacagagtttggaattcacacttattgcgattatgattgtgtcgaataaacgatgcgaatgaaagttgataagactcgtctcctcgcttagtccttcatttcttccatttgtgtagTGAACTTTCACCGCGAGGACATGGTTCAGCCGCACTTCCAGCCGTCAACACAAAGGTTTCAGGAACACGAATAGGGCATCAGGGCCATAGCGGGATGTCA
species | Physcomitrella patens |
transcript | PP1S8_299V6.1 |
intron # | 12 |
splice site | 3' |
intron type | U2 |
EST: GAGACTGATGCGAGCTATTCTCCCCAACCCAGAAAAAGAGTTTCAACCAG TGAACTTTCACCGCGAGGACATGGTTCAGCCGCACTTCCAGCCGTCAACAC
genomic: GAGACTGATGCGAGCTATTCTCCCCAACCCAGAAAAAGAGTTTCAACCAGgttactttcg ... atttgtgtagTGAACTTTCACCGCGAGGACATGGTTCAGCCGCACTTCCAGCCGTCAACAC
aaagttgataagactcgtctcctcgcttagtccttcatttcttccatttgtgtagTGAACTTTCACCGCGAGGACATGGTTCAGCCGCACTTCCAGCCGTCAACACAAAGGTTTCAGGAACACGAATAGGGCATCAGGGCCATAGCGGGATGTCA
agttgat putative branch site (score: 14)
tccttcatttcttcca putative PPT
ttcattt TA-rich tract