1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' |
...tgccaagaactagagcgcacggatcggagagaatctttgagatcaaaagatttgtttccggtttggtgcttaatctttcgagtgatcttctggtgtgcagAAACGGAAGGGACTTGCCGAGTACCTTGTTGAGGAGATGAGACTTTGTAATGTTGCGCCAGATACACACACTTGTTCCCAAGTGATTTCCTTATACATGC
species | Physcomitrella patens |
transcript | PP1S39_340V6.1 |
intron # | 12 |
splice site | 3' |
intron type | U2 |
EST: AGCCTGATGTTACCACTTTCAACACCTTGCTTGCTTCTGCATCCTATCAT AAACGGAAGGGACTTGCCGAGTACCTTGTTGAGGAGATGAGACTTTGTAATEST: gi|162262553|gb|FC439544.1|FC439544
genomic: AGCCTGATGTTACCACTTTCAACACCTTGCTTGCTTCTGCATCCTATCATgtaagacacc ... tggtgtgcagAAACGGAAGGGACTTGCCGAGTACCTTGTTGAGGAGATGAGACTTTGTAAT
EST: AGCCTGATGTTACCACTTTCAACACCTTGCTTGCTTCTGCATCCTATCAT AAACGGAAGGGACTTGCCGAGTACCTTGTTGAGGAGATGAGACTTTGTAAT
genomic: AGCCTGATGTTACCACTTTCAACACCTTGCTTGCTTCTGCATCCTATCATgtaagacacc ... tggtgtgcagAAACGGAAGGGACTTGCCGAGTACCTTGTTGAGGAGATGAGACTTTGTAAT
aaagatttgtttccggtttggtgcttaatctttcgagtgatcttctggtgtgcagAAACGGAAGGGACTTGCCGAGTACCTTGTTGAGGAGATGAGACTTTGTAATGTTGCGCCAGATACACACACTTGTTCCCAAGTGATTTCCTTATACATGC
gcttaat putative branch site (score: 4)
tcttct putative PPT
ttaatcttt TA-rich tract