1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' |
gtatgctttgctatgataattcatccctttttggtatttttgcatgctaccttatagtattactttattacttagaattcatgtgaatcctgatcatttgtgatcgttttgcagCATGGATGAAATTGACATAGCTTACAGGGAGGCGTTACTCGGTCGGGCATCATCTAGGCCTTTGATTGAAATGACCATCCCTTCTGTCTTGGATGAAACA
species | Physcomitrella patens |
transcript | PP1S224_84V6.1 |
intron # | 12 |
splice site | 3' |
intron type | U2 |
EST: ACACTGCTGGGCCCCGAGCATTGTGGGACCATCCATCTTGGTGCTGACTG CATGGATGAAATTGACATAGCTTACAGGGAGGCGTTACTCGGTCGGGCATCEST: gi|37846467|gb|BJ604475.1|BJ604475
genomic: ACACTGCTGGG-CCCGAGCATTGTGGGACCATCCATCTTGGTGCTGACTGgtatgctttg ... cgttttgcagCATGGATGAAATTGACATAGCTTACAGGGAGGCGTTACTCGGTCGGGCATC
EST: ACACTGCTGGGCCCCGAGCATTGTGGGACCATCCATCTTGGTGCTGACTG CATGGATGAAATTGACATAGCTTACAGGGAGGCGTTACTCGGTCGGGCATCEST: gi|208399938|gb|DC925206.1|DC925206
genomic: ACACTGCTGGG-CCCGAGCATTGTGGGACCATCCATCTTGGTGCTGACTGgtatgctttg ... cgttttgcagCATGGATGAAATTGACATAGCTTACAGGGAGGCGTTACTCGGTCGGGCATC
EST: AACACTGCTGGGCCCGAGCATTGTGGGACCATCCATCTTGGTGCTGACTG CATGGATGAAATTGACATAGCTTACAGGGAGGCGTTACTCGGTCGGGCATC
genomic: AACACTGCTGGGCCCGAGCATTGTGGGACCATCCATCTTGGTGCTGACTGgtatgctttg ... cgttttgcagCATGGATGAAATTGACATAGCTTACAGGGAGGCGTTACTCGGTCGGGCATC
ttactttattacttagaattcatgtgaatcctgatcatttgtgatcgttttgcagCATGGATGAAATTGACATAGCTTACAGGGAGGCGTTACTCGGTCGGGCATCATCTAGGCCTTTGATTGAAATGACCATCCCTTCTGTCTTGGATGAAACA
tcctgat putative branch site (score: 1)
tcgtttt putative PPT
ttattacttagaatt TA-rich tract