1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
gtaatcatgctttgccatctgtttgtcgcggtcttgctgccagattcgccttctccatgcttgctgaagagcatttaacaatactgactaggcacctgggcatcttggtttgtggaaacagATCAAAGGGGCTGAGGAAATATACAGCGATTGATAAATGGAACACTCAACTCAAGTCACTTTCTCAAACAGTGACGGCAAGGATTGGTTAGCAACATGCA
species | Physcomitrella patens |
transcript | PP1S90_192V6.1 |
intron # | 11 |
splice site | 3' |
intron type | U2 |
EST: GTGCATGGTCATATTGATCAAGTAAACCAATTGCTGGAGCTTGGTGACAG ATCAAAGGGGCTGAGGAAATATACAGCGATTGATAAATGGAACACTCAACTEST: gi|162172074|gb|FC347963.1|FC347963
genomic: GTGCATGGTCATATTGATCAAGTAAACCAATTGCTGGAGCTTGGTGACAGgtaatcatgc ... gtggaaacagATCAAAGGGGCTGAGGAAATATACAGCGATTGATAAATGGAACACTCAACT
EST: GTGCATGGTCATATTGATCAAGTAAACCAATTGCTGGAGCTTGGTGACAG ATCAAAGGGGCTGAGGAAATATACAGCGATTGATAAATGGAACACTCAACTEST: gi|67699610|gb|BJ959843.1|BJ959843
genomic: GTGCATGGTCATATTGATCAAGTAAACCAATTGCTGGAGCTTGGTGACAGgtaatcatgc ... gtggaaacagATCAAAGGGGCTGAGGAAATATACAGCGATTGATAAATGGAACACTCAACT
EST: GTGCATGGTCATATTGATCAAGTAAACCAATTGCTGGAGCTTGGTGACAG ATCAAAGGGGCTGAGGAAATATACAGCGATTGATAAATGGAACACTCAACTEST: gi|162264897|gb|FC440672.1|FC440672
genomic: GTGCATGGTCATATTGATCAAGTAAACCAATTGCTGGAGCTTGGTGACAGgtaatcatgc ... gtggaaacagATCAAAGGGGCTGAGGAAATATACAGCGATTGATAAATGGAACACTCAACT
EST: GTGCATGGTCATATTGATCAAGTAAACCAATTGCTGGAGCTTGGTGACAG ATCAAAGGGGCTGAGGAAATATACAGCGATTGATAAATGGAACACTCAACTEST: gi|162247841|gb|FC419469.1|FC419469
genomic: GTGCATGGTCATATTGATCAAGTAAACCAATTGCTGGAGCTTGGTGACAGgtaatcatgc ... gtggaaacagATCAAAGGGGCTGAGGAAATATACAGCGATTGATAAATGGAACACTCAACT
EST: GTGCATGGTCATATTGATCAAGTAAACCAATTGCTGGAGCTTGGTGACAG ATCAAAGGGGCTGAGGAAATATACAGCGATTGATAAATGGAACACTCAACTEST: gi|162247842|gb|FC419470.1|FC419470
genomic: GTGCATGGTCATATTGATCAAGTAAACCAATTGCTGGAGCTTGGTGACAGgtaatcatgc ... gtggaaacagATCAAAGGGGCTGAGGAAATATACAGCGATTGATAAATGGAACACTCAACT
EST: GTGCATGGTCATATTTATCAACTAAACCAATTGCTGGAGCTTGGTGACAG ATCAAAGGGGCTGAGGAAATATACAGCGATTGATAAATGGAACACTCAACT
genomic: GTGCATGGTCATATTGATCAAGTAAACCAATTGCTGGAGCTTGGTGACAGgtaatcatgc ... gtggaaacagATCAAAGGGGCTGAGGAAATATACAGCGATTGATAAATGGAACACTCAACT
aagagcatttaacaatactgactaggcacctgggcatcttggtttgtggaaacagATCAAAGGGGCTGAGGAAATATACAGCGATTGATAAATGGAACACTCAACTCAAGTCACTTTCTCAAACAGTGACGGCAAGGATTGGTTAGCAACATGCA
tactgac putative branch site (score: 1)
atttaacaata TA-rich tract