1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' |
...gtaccagctagcagtttgagtttccgttttttgggtcttgactgtttatgatgacttgtgcataaagttattcaactgacatcaggtgttctgaacgcagATAAGGACACTAAAAGGTCACACCAATGAAAAGAATTTTGTTGGACTTACTGTCAACAGTGAGTATATCGCCTGTGGCAGTGAAACAAACGAGGTGTTTG
species | Physcomitrella patens |
transcript | PP1S86_153V6.2 |
intron # | 11 |
splice site | 3' |
intron type | U2 |
EST: CATCTACTGATAGTACTTTGTGTCTTTGGGATGTCAAAGAGAACTGCCCG ATAAGGACACTAAAAGGTCACACCAATGAAAAGAATTTTGTTGGACTTACTEST: gi|100399476|gb|BY972738.1|BY972738
genomic: CATCTACTGATAGTACTTTGTGTCTTTGGGATGTCAAAGAGAACTGCCCGgtacgctttc ... ctgaacgcagATAAGGACACTAAAAGGTCACACCAATGAAAAGAATTTTGTTGGACTTACT
EST: CATCTACTGATAGTACTTTGTGTCTTTGGGATGTCAAAGAGAACTGCCCG ATAAGGACACTAAAAGGTCACACCAATGAAAAGAATTTTGTTGGACTTACT
genomic: CATCTACTGATAGTACTTTGTGTCTTTGGGATGTCAAAGAGAACTGCCCGgtacgctttc ... ctgaacgcagATAAGGACACTAAAAGGTCACACCAATGAAAAGAATTTTGTTGGACTTACT
ttatgatgacttgtgcataaagttattcaactgacatcaggtgttctgaacgcagATAAGGACACTAAAAGGTCACACCAATGAAAAGAATTTTGTTGGACTTACTGTCAACAGTGAGTATATCGCCTGTGGCAGTGAAACAAACGAGGTGTTTG
aactgac putative branch site (score: 2)
ataaagttattcaa TA-rich tract