1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
...tatacatcaaagaggctttaaacatgcaatacttttggttttgcacttaccggtgaattctactgttggtgacttttttaattcctgtttctttgtgtagGCTCTGCACCGGCTTGGCAAGCAAGACGTTGCAGTTTATGACGGTTCATGGACGGAATGGGGTTCTCGCTCTGATACCCCTGTTGAAACCAGTGTTCCTA
species | Physcomitrella patens |
transcript | PP1S78_4V6.2 |
intron # | 11 |
splice site | 3' |
intron type | U2 |
EST: CAATTGTGGCATCCTGCGGCACTGGTGTGACAGCTTGTATTTTAGCTCTG GCTCTGCACCGGCTTGGCAAGCAAGACGTTGCAGTTTATGACGGTTCATGGEST: gi|162277312|gb|FC453118.1|FC453118
genomic: CAATTGTGGCATCCTGCGGCACTGGTGTGACAGCTTGTATTTTAGCTCTGgtgagtcaat ... ctttgtgtagGCTCTGCACCGGCTTGGCAAGCAAGACGTTGCAGTTTATGACGGTTCATGG
EST: CAATTGTGGCATCCTGCGGCACTGGTGTGACAGCTTGTATTTTAGCTCTG GCTCTGCACCGGCTTGGCAAGCAAGACGTTGCAGTTTATGACGGTTCATGGEST: gi|6166916|gb|AW145180.1|AW145180
genomic: CAATTGTGGCATCCTGCGGCACTGGTGTGACAGCTTGTATTTTAGCTCTGgtgagtcaat ... ctttgtgtagGCTCTGCACCGGCTTGGCAAGCAAGACGTTGCAGTTTATGACGGTTCATGG
EST: CAATTGTGGCATCCTGCGGCACTGGTGTGACAGCTTGTATTTTAGCTCTG GCTCTGCACCGGCTTGGCAAGCAAGACGTTGCAGTTTATGACGGTTCATGGEST: gi|162268668|gb|FC445165.1|FC445165
genomic: CAATTGTGGCATCCTGCGGCACTGGTGTGACAGCTTGTATTTTAGCTCTGgtgagtcaat ... ctttgtgtagGCTCTGCACCGGCTTGGCAAGCAAGACGTTGCAGTTTATGACGGTTCATGG
EST: CAATTGTGGCATCCTGCGGCACTGGTGTGACAGCTTGTATTTTAGCTCTG GCTCTGCACCGGCTTGGCAAGCAAGACGTTGCAGTTTATGACGGTTCATGGEST: gi|18334696|gb|BJ166713.1|BJ166713
genomic: CAATTGTGGCATCCTGCGGCACTGGTGTGACAGCTTGTATTTTAGCTCTGgtgagtcaat ... ctttgtgtagGCTCTGCACCGGCTTGGCAAGCAAGACGTTGCAGTTTATGACGGTTCATGG
EST: CAATTGTGGCATCCTGCGGCACTGGTGTGACAGCTTGTATTTTAGCTCTG GCTCTGCACCGGCTTGGCAAGCAAGACGTTGCAGTTTATGACGGTTCATGGEST: gi|67695705|gb|BJ955938.1|BJ955938
genomic: CAATTGTGGCATCCTGCGGCACTGGTGTGACAGCTTGTATTTTAGCTCTGgtgagtcaat ... ctttgtgtagGCTCTGCACCGGCTTGGCAAGCAAGACGTTGCAGTTTATGACGGTTCATGG
EST: CAATTGTGGCATCCTGCGGCACTGGTGTGACAGCTTGTATTTTAGCTCTG GCTCTGCACCGGCTTGGCAAGCAAGACGTTGCAGTTTATGACGGTTCATGGEST: gi|208370489|gb|DC952192.1|DC952192
genomic: CAATTGTGGCATCCTGCGGCACTGGTGTGACAGCTTGTATTTTAGCTCTGgtgagtcaat ... ctttgtgtagGCTCTGCACCGGCTTGGCAAGCAAGACGTTGCAGTTTATGACGGTTCATGG
EST: CAATTGTGGCATCCTGCGGCACTGGTGTGACAGCTTGTATTTTAGCTCTG GCTCTGCACCGGCTTGGCAAGCAAGACGTTGCAGTTTATGACGGTTCATGGEST: gi|37852646|gb|BJ610654.1|BJ610654
genomic: CAATTGTGGCATCCTGCGGCACTGGTGTGACAGCTTGTATTTTAGCTCTGgtgagtcaat ... ctttgtgtagGCTCTGCACCGGCTTGGCAAGCAAGACGTTGCAGTTTATGACGGTTCATGG
EST: CAATTGTGGCATCCTGCGGTACTGGTGTGACAGCTTGTATTTTAGCTCTG GCTCTGCACCGGCTTGGCAAGCAAGACGTTGCAGTTTATGACGGTTCATGGEST: gi|67726274|gb|BJ976533.1|BJ976533
genomic: CAATTGTGGCATCCTGCGGCACTGGTGTGACAGCTTGTATTTTAGCTCTGgtgagtcaat ... ctttgtgtagGCTCTGCACCGGCTTGGCAAGCAAGACGTTGCAGTTTATGACGGTTCATGG
EST: CAATTGTGGCATCCTGCGGCACTGGTGTGACAGCTTGTATTTTAGCTCTG GCTCTGCACCGGCTTGGCAAGCAAGACGTTGCAGTTTATGACGGTTCATGGEST: gi|162273260|gb|FC449241.1|FC449241
genomic: CAATTGTGGCATCCTGCGGCACTGGTGTGACAGCTTGTATTTTAGCTCTGgtgagtcaat ... ctttgtgtagGCTCTGCACCGGCTTGGCAAGCAAGACGTTGCAGTTTATGACGGTTCATGG
EST: CAATTGTGGCATCCTGCGGCACTGGTGTGACAGCTTGTATTTTAGCTCTG GCTCTGCACCGGCTTGGCAAGCAAGACGTTGCAGTTTATGACGGTTCATGGEST: gi|67508643|gb|BJ941504.1|BJ941504
genomic: CAATTGTGGCATCCTGCGGCACTGGTGTGACAGCTTGTATTTTAGCTCTGgtgagtcaat ... ctttgtgtagGCTCTGCACCGGCTTGGCAAGCAAGACGTTGCAGTTTATGACGGTTCATGG
EST: CAATTGTGGCATCCTGCGGCACTGGTGTGACAGCTTGTATTTTAGCTCTG GCTCTGCACCGGCTTGGCAAGCAAGACGTTGCAGTTTATGACGGTTCATGGEST: gi|67725181|gb|BJ975440.1|BJ975440
genomic: CAATTGTGGCATCCTGCGGCACTGGTGTGACAGCTTGTATTTTAGCTCTGgtgagtcaat ... ctttgtgtagGCTCTGCACCGGCTTGGCAAGCAAGACGTTGCAGTTTATGACGGTTCATGG
EST: CAATTGTGGCATCCTGCGGCACTGGTGTGACAGCTTGTATTTTAGCTCTG GCTCTGCACCGGCTTGGCAAGCAAGACGTTGCAGTTTATGACGGTTCATGGEST: gi|67692391|gb|BJ952624.1|BJ952624
genomic: CAATTGTGGCATCCTGCGGCACTGGTGTGACAGCTTGTATTTTAGCTCTGgtgagtcaat ... ctttgtgtagGCTCTGCACCGGCTTGGCAAGCAAGACGTTGCAGTTTATGACGGTTCATGG
EST: CAATTGTGGCATCCTGCGGCACTGGTGTGACAGCTTGTATTTTAGCTCTG GCTCTGCACCGGCTTGGCAAGCAAGACGTTGCAGTTTATGACGGTTCATGGEST: gi|67724933|gb|BJ975192.1|BJ975192
genomic: CAATTGTGGCATCCTGCGGCACTGGTGTGACAGCTTGTATTTTAGCTCTGgtgagtcaat ... ctttgtgtagGCTCTGCACCGGCTTGGCAAGCAAGACGTTGCAGTTTATGACGGTTCATGG
EST: CAATTGTGGCATCCTGCGGCACTGGTGTGACAGCTTGTATTTTAGCTCTG GCTCTGCACCGGCTTGGCAAGCAAGACGTTGCAGTTTATGACGGTTCATGGEST: gi|67695360|gb|BJ955593.1|BJ955593
genomic: CAATTGTGGCATCCTGCGGCACTGGTGTGACAGCTTGTATTTTAGCTCTGgtgagtcaat ... ctttgtgtagGCTCTGCACCGGCTTGGCAAGCAAGACGTTGCAGTTTATGACGGTTCATGG
EST: CAATTGTGGCATCCTGCGGCACTGGTGTGACAGCTTGTATTTTAGCTCTG GCTCTGCACCGGCTTGGCAAGCAAGACGTTGCAGTTTATGACGGTTCATGGEST: gi|18335656|gb|BJ167676.1|BJ167676
genomic: CAATTGTGGCATCCTGCGGCACTGGTGTGACAGCTTGTATTTTAGCTCTGgtgagtcaat ... ctttgtgtagGCTCTGCACCGGCTTGGCAAGCAAGACGTTGCAGTTTATGACGGTTCATGG
EST: CAATTGTGGCATCCTGCGGCACTGGTGTGACAGCTTGTATTTTAGCTCTG GCTCTGCACCGGCTTGGCAAGCAAGACGTTGCAGTTTATGACGGTTCATGGEST: gi|67572332|gb|BJ945156.1|BJ945156
genomic: CAATTGTGGCATCCTGCGGCACTGGTGTGACAGCTTGTATTTTAGCTCTGgtgagtcaat ... ctttgtgtagGCTCTGCACCGGCTTGGCAAGCAAGACGTTGCAGTTTATGACGGTTCATGG
EST: CAATTGTGGCATCCTGCGGCACTGGTGTGACAGCTTGTATTTTAGCTCTG GCTCTGCACCGGCTTGGCAAGCAAGACGTTGCAGTTTATGACGGTTCATGG
genomic: CAATTGTGGCATCCTGCGGCACTGGTGTGACAGCTTGTATTTTAGCTCTGgtgagtcaat ... ctttgtgtagGCTCTGCACCGGCTTGGCAAGCAAGACGTTGCAGTTTATGACGGTTCATGG
cttaccggtgaattctactgttggtgacttttttaattcctgtttctttgtgtagGCTCTGCACCGGCTTGGCAAGCAAGACGTTGCAGTTTATGACGGTTCATGGACGGAATGGGGTTCTCGCTCTGATACCCCTGTTGAAACCAGTGTTCCTA
cttttttaattcctgt CT-rich tract
tgacttttttaatt TA-rich tract