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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtatttttattctctattgaagctatcaatattgtagatgttgtctaaacagtgtttcagatggtagagaccaggtgttagcatttatgacagatgttgattacgtgcatctgctcctctttcagGTGACTGAATTCCCCGTCACCCCTATTCCTAAGGAGAAGTTGGTCGACACTAATGCAGCTG

Basic information

species Physcomitrella patens
transcript PP1S74_140V6.1
intron # 11
splice site 3'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|208376489|gb|DC922520.1|DC922520
EST:     CTGTCGTCACCCAGGGAACTGACCCCACAATTGTTGCTGAAGATGGAAAG                         GTGACTGAATTCCCCGTCACCCCTATTCCAAAGGAGAAGTTGGTCGACACT
genomic: CTGTCATCACCCAGGGAACTGACCCCACAATTGTTGCTGAAGATGGAAAGgtatttttat ... cctctttcagGTGACTGAATTCCCCGTCACCCCTATTCCTAAGGAGAAGTTGGTCGACACT
EST: gi|208364850|gb|DC957887.1|DC957887
EST:     CTGTCATCACCCAGGGAACTGACCCCACAATTGTTGCTGAAGATGGAAAG                         GTGACTGAATTCCCCGTCACCCCTATTCCTAAGGAGAAGTTGGTCGACACT
genomic: CTGTCATCACCCAGGGAACTGACCCCACAATTGTTGCTGAAGATGGAAAGgtatttttat ... cctctttcagGTGACTGAATTCCCCGTCACCCCTATTCCTAAGGAGAAGTTGGTCGACACT
EST: gi|208372243|gb|DC948046.1|DC948046
EST:     CTGTCATCACCCAGGGAACTGACCCCACAATTGTTGCTGAAGATGGAAAG                         GTGACTGAATTCCCCGTCACCCCTATTCCTAAGGAGAAGTTGGTCGACACT
genomic: CTGTCATCACCCAGGGAACTGACCCCACAATTGTTGCTGAAGATGGAAAGgtatttttat ... cctctttcagGTGACTGAATTCCCCGTCACCCCTATTCCTAAGGAGAAGTTGGTCGACACT
EST: gi|208356591|gb|DC922381.1|DC922381
EST:     CTGTCATCACCCAGGGAACTGACCCCACAATTGTTGCTGAAGATGGAAAG                         GTGACTGAATTCCCCGTCACCCCTATTCCTAAGGAGAAGTTGGTCGACACT
genomic: CTGTCATCACCCAGGGAACTGACCCCACAATTGTTGCTGAAGATGGAAAGgtatttttat ... cctctttcagGTGACTGAATTCCCCGTCACCCCTATTCCTAAGGAGAAGTTGGTCGACACT
EST: gi|37839167|gb|BJ597175.1|BJ597175
EST:     CTGTCATCACCCAGGGAACTGACCCCACAATTGTTGCTGAAGATGGAAAG                         GTGACTGAATTCCCCGTCACCCCTATTCCTAAGGAGAAGTTGGTCGACACT
genomic: CTGTCATCACCCAGGGAACTGACCCCACAATTGTTGCTGAAGATGGAAAGgtatttttat ... cctctttcagGTGACTGAATTCCCCGTCACCCCTATTCCTAAGGAGAAGTTGGTCGACACT
EST: gi|208383807|gb|DC928082.1|DC928082
EST:     CTGTCATCACCCAGGGAACTGACCCCACAATTGTTGCTGAAGATGGAAAG                         GTGACTGAATTCCCCGTCACCCCTATTCCTAAGGAGAAGTTGGTCGACACT
genomic: CTGTCATCACCCAGGGAACTGACCCCACAATTGTTGCTGAAGATGGAAAGgtatttttat ... cctctttcagGTGACTGAATTCCCCGTCACCCCTATTCCTAAGGAGAAGTTGGTCGACACT
EST: gi|67720885|gb|BJ971144.1|BJ971144
EST:     CTGTCATCACCCAGGGAACTGACCCCACAATTGTTGCTGAAGATGGAAAG                         GTGACTGAATTCCCCGTCACCCCTATTCCTAAGGAGAAGTTGGTCGACACT
genomic: CTGTCATCACCCAGGGAACTGACCCCACAATTGTTGCTGAAGATGGAAAGgtatttttat ... cctctttcagGTGACTGAATTCCCCGTCACCCCTATTCCTAAGGAGAAGTTGGTCGACACT
EST: gi|208345159|gb|DC925457.1|DC925457
EST:     CTGTCATCACCCAGGGAACTGACCCCACAATTGTTGCTGAAGATGGAAAG                         GTGACTGAATTCCCCGTCACCCCTATTCCTAAGGAGAAGTTGGTCGACACT
genomic: CTGTCATCACCCAGGGAACTGACCCCACAATTGTTGCTGAAGATGGAAAGgtatttttat ... cctctttcagGTGACTGAATTCCCCGTCACCCCTATTCCTAAGGAGAAGTTGGTCGACACT
EST: gi|162227965|gb|FC404585.1|FC404585
EST:     CTGTCATCACCCAGGGAACTGACCCCACAGTTGTTGCTGAAGATGGAAAG                         GTGACTGAATTCCCCGTCACCCCTATTCCTAAGGAGAAGTTGGTCGACACT
genomic: CTGTCATCACCCAGGGAACTGACCCCACAATTGTTGCTGAAGATGGAAAGgtatttttat ... cctctttcagGTGACTGAATTCCCCGTCACCCCTATTCCTAAGGAGAAGTTGGTCGACACT
EST: gi|162163035|gb|FC338425.1|FC338425
EST:     CTGTCATCACCCAGGGAACTGACCCCACAGTTGTTGCTGAAGATGGAAAG                         GTGACTGAATTCCCCGTCACCCCTATTCCTAAGGAGAAGTTGGTCGACACT
genomic: CTGTCATCACCCAGGGAACTGACCCCACAATTGTTGCTGAAGATGGAAAGgtatttttat ... cctctttcagGTGACTGAATTCCCCGTCACCCCTATTCCTAAGGAGAAGTTGGTCGACACT
EST: gi|67699393|gb|BJ959626.1|BJ959626
EST:     CTGTCATCACCCAGGGAACTGACCCCACAATTGTTGCTGAAGATGGAAAG                         GTGACTGAATTCCCCGTCACCCCTATTCCTAAGGAGAAGTTGGTCGACACT
genomic: CTGTCATCACCCAGGGAACTGACCCCACAATTGTTGCTGAAGATGGAAAGgtatttttat ... cctctttcagGTGACTGAATTCCCCGTCACCCCTATTCCTAAGGAGAAGTTGGTCGACACT
EST: gi|37843958|gb|BJ601966.1|BJ601966
EST:     CTGTCATCACCCAGGGAACTGACCCCACAATTGTTGCTGAAGATGGAAAG                         GTGACTGAATTCCCCGTCACCCCTATTCCTAAGGAGAAGTTGGTCGACACT
genomic: CTGTCATCACCCAGGGAACTGACCCCACAATTGTTGCTGAAGATGGAAAGgtatttttat ... cctctttcagGTGACTGAATTCCCCGTCACCCCTATTCCTAAGGAGAAGTTGGTCGACACT
EST: gi|208362330|gb|DC954576.1|DC954576
EST:     CTGTCATCACCCAGGGAACTGACCCCACAATTGTTGCTGAAGATGGAAAG                         GTGACTGAATTCCCCGTCACCCCTATTCCTAAGGAGAAGTTGGTCGACACT
genomic: CTGTCATCACCCAGGGAACTGACCCCACAATTGTTGCTGAAGATGGAAAGgtatttttat ... cctctttcagGTGACTGAATTCCCCGTCACCCCTATTCCTAAGGAGAAGTTGGTCGACACT
EST: gi|208347730|gb|DC925603.1|DC925603
EST:     CTGTCATCACCCAGGGAACTGACCCCACAATTGTTGCTGAAGATGGAAAG                         GTGACTGAATTCCCCGTCACCCCTATTCCTAAGGAGAAGTTGGTCGACACT
genomic: CTGTCATCACCCAGGGAACTGACCCCACAATTGTTGCTGAAGATGGAAAGgtatttttat ... cctctttcagGTGACTGAATTCCCCGTCACCCCTATTCCTAAGGAGAAGTTGGTCGACACT
EST: gi|162160597|gb|FC337172.1|FC337172
EST:     CTGTCATCACCCAGGGAACTGACCCCACAGTTGTTGCTGAAGATGGAAAG                         GTGACTGAATTCCCCGTCACCCCTATTCCTAAGGAGAAGTTGGTCGACACT
genomic: CTGTCATCACCCAGGGAACTGACCCCACAATTGTTGCTGAAGATGGAAAGgtatttttat ... cctctttcagGTGACTGAATTCCCCGTCACCCCTATTCCTAAGGAGAAGTTGGTCGACACT
EST: gi|208394555|gb|DC953594.1|DC953594
EST:     CTGTCATCACCCAGGGAACTGACCCCACAATTGTTGCTGAAGATGGAAAG                         GTGACTGAATTCCCCGTCACCCCTATTCCTAAGGAGAAGTTGGTCGACACT
genomic: CTGTCATCACCCAGGGAACTGACCCCACAATTGTTGCTGAAGATGGAAAGgtatttttat ... cctctttcagGTGACTGAATTCCCCGTCACCCCTATTCCTAAGGAGAAGTTGGTCGACACT
EST: gi|208374223|gb|DC945269.1|DC945269
EST:     CTGTCATCACCCAGGGAACTGACCCCACAATTGTTGCTGAAGATGGAAAG                         GTGACTGAATTCCCCGTCACCCCTATTCCTAAGGAGAAGTTGGTCGACACT
genomic: CTGTCATCACCCAGGGAACTGACCCCACAATTGTTGCTGAAGATGGAAAGgtatttttat ... cctctttcagGTGACTGAATTCCCCGTCACCCCTATTCCTAAGGAGAAGTTGGTCGACACT
EST: gi|67720670|gb|BJ970929.1|BJ970929
EST:     CTGTCATCACCCAGGGAACTGACCCCACAATTGTTGCTGAAGATGGAAAG                         GTGACTGAATTCCCCGTCACCCCTATTCCTAAGGAGAAGTTGGTCGACACT
genomic: CTGTCATCACCCAGGGAACTGACCCCACAATTGTTGCTGAAGATGGAAAGgtatttttat ... cctctttcagGTGACTGAATTCCCCGTCACCCCTATTCCTAAGGAGAAGTTGGTCGACACT
EST: gi|67722619|gb|BJ972878.1|BJ972878
EST:     CTGTCATCACCCAGGGAACTGACCCCACAATTGTTGCTGAAGATGGAAAG                         GTGACTGAATTCCCCGTCACCCCTATTCCTAAGGAGAAGTTGGTCGACACT
genomic: CTGTCATCACCCAGGGAACTGACCCCACAATTGTTGCTGAAGATGGAAAGgtatttttat ... cctctttcagGTGACTGAATTCCCCGTCACCCCTATTCCTAAGGAGAAGTTGGTCGACACT
EST: gi|162184643|gb|FC360841.1|FC360841
EST:     CTGTCATCACCCAGGGAACTGACCCCACAGTTGTTGCTGAAGATGGAAAG                         GTGACTGAATTCCCCGTCACCCCTATTCCTAAGGAGAAGTTGGTCGACACT
genomic: CTGTCATCACCCAGGGAACTGACCCCACAATTGTTGCTGAAGATGGAAAGgtatttttat ... cctctttcagGTGACTGAATTCCCCGTCACCCCTATTCCTAAGGAGAAGTTGGTCGACACT
EST: gi|18337850|gb|BJ169874.1|BJ169874
EST:     CTGTCATCACCCAGGGAACTGACCCCACAATTGTTGCTGAAGATGGAAAG                         GTGACTGAATTCCCCGTCACCCCTATTCCTAAGGAGAAGTTGGTCGACACT
genomic: CTGTCATCACCCAGGGAACTGACCCCACAATTGTTGCTGAAGATGGAAAGgtatttttat ... cctctttcagGTGACTGAATTCCCCGTCACCCCTATTCCTAAGGAGAAGTTGGTCGACACT
EST: gi|208353070|gb|DC926093.1|DC926093
EST:     CTGTCATCACCCAGGGAACTGACCCCACAATTGTTGCTGAAGATGGAAAG                         GTGACTGAATTCCCCGTCACCCCTATTCCTAAGGAGAAGTTGGTCGACACT
genomic: CTGTCATCACCCAGGGAACTGACCCCACAATTGTTGCTGAAGATGGAAAGgtatttttat ... cctctttcagGTGACTGAATTCCCCGTCACCCCTATTCCTAAGGAGAAGTTGGTCGACACT
EST: gi|208368488|gb|DC947889.1|DC947889
EST:     CTGTCATCACCCAGGGAACTGACCCCACAATTGTTGCTGAAGATGGAAAG                         GTGACTGAATTCCCCGTCACCCCTATTCCTAAGGAGAAGTTGGTCGACACT
genomic: CTGTCATCACCCAGGGAACTGACCCCACAATTGTTGCTGAAGATGGAAAGgtatttttat ... cctctttcagGTGACTGAATTCCCCGTCACCCCTATTCCTAAGGAGAAGTTGGTCGACACT
EST: gi|208369247|gb|DC944564.1|DC944564
EST:     CTGTCATCACCCAGGGAACTGACCCCACAATTGTTGCTGAAGATGGAAAG                         GTGACTGAATTCCCCGTCACCCCTATTCCTAAGGAGAAGTTGGTCGACACT
genomic: CTGTCATCACCCAGGGAACTGACCCCACAATTGTTGCTGAAGATGGAAAGgtatttttat ... cctctttcagGTGACTGAATTCCCCGTCACCCCTATTCCTAAGGAGAAGTTGGTCGACACT
EST: gi|208395850|gb|DC924260.1|DC924260
EST:     CTGTCATCACCCAGGGAACTGACCCCACAATTGTTGCTGAAGATGGAAAG                         GTGACTGAATTCCCCGTCACCCCTATTCCTAAGGAGAAGTTGGTCGACACT
genomic: CTGTCATCACCCAGGGAACTGACCCCACAATTGTTGCTGAAGATGGAAAGgtatttttat ... cctctttcagGTGACTGAATTCCCCGTCACCCCTATTCCTAAGGAGAAGTTGGTCGACACT
EST: gi|37841119|gb|BJ599127.1|BJ599127
EST:     CTGTCATCACCCAGGGAACTGACCCCACAATTGTTGCTGAAGATGGAAAG                         GTGACTGAATTCCCCGTCACCCCTATTCCTAAGGAGAAGTTGGTCGACACT
genomic: CTGTCATCACCCAGGGAACTGACCCCACAATTGTTGCTGAAGATGGAAAGgtatttttat ... cctctttcagGTGACTGAATTCCCCGTCACCCCTATTCCTAAGGAGAAGTTGGTCGACACT
EST: gi|67727318|gb|BJ977577.1|BJ977577
EST:     CTGTCATCACCCAGGGAACTGACCCCACAATTGTTGCTGAAGATGGAAAG                         GTGACTGAATTCCCCGTCACCCCTATTCCTAAGGAGAAGTTGGTCGACACT
genomic: CTGTCATCACCCAGGGAACTGACCCCACAATTGTTGCTGAAGATGGAAAGgtatttttat ... cctctttcagGTGACTGAATTCCCCGTCACCCCTATTCCTAAGGAGAAGTTGGTCGACACT
EST: gi|208365534|gb|DC954775.1|DC954775
EST:     CTGTCATCACCCAGGGAACTGACCCCACAATTGTTGCTGAAGATGGAAAG                         GTGACTGAATTCCCCGTCACCCCTATTCCTAAGGAGAAGTTGGTCGACACT
genomic: CTGTCATCACCCAGGGAACTGACCCCACAATTGTTGCTGAAGATGGAAAGgtatttttat ... cctctttcagGTGACTGAATTCCCCGTCACCCCTATTCCTAAGGAGAAGTTGGTCGACACT
EST: gi|208347297|gb|DC925321.1|DC925321
EST:     CTGTCATCACCCAGGGAACTGACCCCACAATTGTTGCTGAAGATGGAAAG                         GTGACTGAATTCCCCGTCACCCCTATTCCTAAGGAGAAGTTGGTCGACACT
genomic: CTGTCATCACCCAGGGAACTGACCCCACAATTGTTGCTGAAGATGGAAAGgtatttttat ... cctctttcagGTGACTGAATTCCCCGTCACCCCTATTCCTAAGGAGAAGTTGGTCGACACT
EST: gi|162175918|gb|FC351596.1|FC351596
EST:     CTGTCATCACCCAGGGAACTGACCCCACAGTTGTTGCTGAAGATGGAAAG                         GTGACTGAATTCCCCGTCACCCCTATTCCTAAGGAGAAGTTGGTCGACACT
genomic: CTGTCATCACCCAGGGAACTGACCCCACAATTGTTGCTGAAGATGGAAAGgtatttttat ... cctctttcagGTGACTGAATTCCCCGTCACCCCTATTCCTAAGGAGAAGTTGGTCGACACT
EST: gi|208394056|gb|DC957137.1|DC957137
EST:     CTGTCATCACCCAGGGAACTGACCCCACAATTGTTGCTGAAGATGGAAAG                         GTGACTGAATTCCCCGTCACCCCTATTCCTAAGGAGAAGTTGGTCGACACT
genomic: CTGTCATCACCCAGGGAACTGACCCCACAATTGTTGCTGAAGATGGAAAGgtatttttat ... cctctttcagGTGACTGAATTCCCCGTCACCCCTATTCCTAAGGAGAAGTTGGTCGACACT
EST: gi|208346565|gb|DC916831.1|DC916831
EST:     CTGTCATCACCCAGGGAACTGACCCCACAATTGTTGCTGAAGATGGAAAG                         GTGACTGAATTCCCCGTCACCCCTATTCCTAAGGAGAAGTTGGTCGACACT
genomic: CTGTCATCACCCAGGGAACTGACCCCACAATTGTTGCTGAAGATGGAAAGgtatttttat ... cctctttcagGTGACTGAATTCCCCGTCACCCCTATTCCTAAGGAGAAGTTGGTCGACACT
EST: gi|18340220|gb|BJ172248.1|BJ172248
EST:     CTGTCATCACCCAGGGAACTGACCCCACAATTGTTGCTGAAGATGGAAAG                         GTGACTGAATTCCCCGTCACCCCTATTCCTAAGGAGAAGTTGGTCGACACT
genomic: CTGTCATCACCCAGGGAACTGACCCCACAATTGTTGCTGAAGATGGAAAGgtatttttat ... cctctttcagGTGACTGAATTCCCCGTCACCCCTATTCCTAAGGAGAAGTTGGTCGACACT
EST: gi|208367374|gb|DC951292.1|DC951292
EST:     CTGTCATCACCCAGGGAACTGACCCCACAATTGTTGCTGAAGATGGAAAG                         GTGACTGAATTCCCCGTCACCCCTATTCCTAAGGAGAAGTTGGCCGACACT
genomic: CTGTCATCACCCAGGGAACTGACCCCACAATTGTTGCTGAAGATGGAAAGgtatttttat ... cctctttcagGTGACTGAATTCCCCGTCACCCCTATTCCTAAGGAGAAGTTGGTCGACACT
EST: gi|208356213|gb|DC957331.1|DC957331
EST:     CTGTCATCACCCAGGGAACTGACCCCACAATTGTTGCTGAAGATGGAAAG                         GTGACTGAATTCCCCGTCACCCCTATTCCTAAGGAGAAGTTGGTCGACACT
genomic: CTGTCATCACCCAGGGAACTGACCCCACAATTGTTGCTGAAGATGGAAAGgtatttttat ... cctctttcagGTGACTGAATTCCCCGTCACCCCTATTCCTAAGGAGAAGTTGGTCGACACT
EST: gi|37845825|gb|BJ603833.1|BJ603833
EST:     CTGTCATCACCCAGGGAACTGACCCCACAATTGTTGCTGAAGATGGAAAG                         GTGACTGAATTCCCCGTCACCCCTATTCCTAAGGAGAAGTTGGTCGACACT
genomic: CTGTCATCACCCAGGGAACTGACCCCACAATTGTTGCTGAAGATGGAAAGgtatttttat ... cctctttcagGTGACTGAATTCCCCGTCACCCCTATTCCTAAGGAGAAGTTGGTCGACACT
EST: gi|208374190|gb|DC945236.1|DC945236
EST:     CTGTCATCACCCAGGGAACTGACCCCACAATTGTTGCTGAAGATGGAAAG                         GTGACTGAATTCCCCGTCACCCCTATTCCTAAGGAGAAGTTGGTCGACACT
genomic: CTGTCATCACCCAGGGAACTGACCCCACAATTGTTGCTGAAGATGGAAAGgtatttttat ... cctctttcagGTGACTGAATTCCCCGTCACCCCTATTCCTAAGGAGAAGTTGGTCGACACT
EST: gi|37840264|gb|BJ598272.1|BJ598272
EST:     TGTCATCACCCAGGGAACTGACCCCACCAATTGTTGCTGAAGATGGAAAG                         GTGACTGAATTCCCCGTCACCCCTATTCCTAAGGAGAAGTTGGTCGACACT
genomic: TGTCATCACCCAGGGAACTGACCCCA-CAATTGTTGCTGAAGATGGAAAGgtatttttat ... cctctttcagGTGACTGAATTCCCCGTCACCCCTATTCCTAAGGAGAAGTTGGTCGACACT
EST: gi|162209215|gb|FC385434.1|FC385434
EST:     CTGTCATCACCCAGGGAACTGACCCCACAGTTGTTGCTGAAGATGGAAAG                         GTGACTGAATTCCCCGTCACCCCTATTCCTAAGGAGAAGTTGGTCGACACT
genomic: CTGTCATCACCCAGGGAACTGACCCCACAATTGTTGCTGAAGATGGAAAGgtatttttat ... cctctttcagGTGACTGAATTCCCCGTCACCCCTATTCCTAAGGAGAAGTTGGTCGACACT

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 1 RNA-Seqlibrary.


Block sizes: 33 (upstream exon), 30 (downstream exon)
Score: 19

CGTAAAGTTGGCTGCGTTACCGAAAGCTGGCGGCACCCACAAGCGTGTCGCTGTCATCACCCAGGGAACTGACCCCACAATTGTTGCTGAAGATGGAAAGgtatttttat ... cctctttcagGTGACTGAATTCCCCGTCACCCCTATTCCTAAGGAGAAGTTGGTCGACACTAATGCAGCTG




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 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

ccaggtgttagcatttatgacagatgttgattacgtgcatctgctcctctttcagGTGACTGAATTCCCCGTCACCCCTATTCCTAAGGAGAAGTTGGTCGACACTAATGCAGCTG
                        tgttgat  putative branch site (score: 19)
                                     catctgctcctctttc  putative PPT
            atttatga  TA-rich tract
















Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
gtatttttattctctattgaagctatcaatattgtagatgttgtctaaacagtgtttcagatggtagagaccaggtgttagcatttatgacagatgttgattacgtgcatctgctcctctttcagGTGACTGAATTCCCCGTCACCCCTATTCCTAAGGAGAAGTTGGTCGACACTAATGCAGCTG

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  AAGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGGAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  GGAGAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  AGAAGT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  GCAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAGCTG