1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' |
gtatgcatgatttggcaaatcagcgactatcttgtagctcttcatttttcgttctgtgaaatttcatctgaggtagcattcatcgaattgaattctccttcacgttgttttgacgtgaggttttttctggttgttgtagGCGTACCTTTCATCGTGAAAGCTGGGAAGGCGTTGGATGCTAAAAAAGTCGAAATACGTGTGCAGTTTAGGGACACTCCTGGTGACATCTTTAATT
species | Physcomitrella patens |
transcript | PP1S73_244V6.3 |
intron # | 11 |
splice site | 3' |
intron type | U2 |
EST: TCCTACTTTTGCATCTCTTGCTCTTCGTATCAACAACGAACGCTGGGATG GCGTACCTTTCATCGTGAAAGCTGGGAAGGCGTTGGATGCTAAGAAAGTCGEST: gi|100389158|gb|BY952362.1|BY952362
genomic: TCCTACTTTTGCATCTCTTGCTCTTCGTATCAACAACGAACGCTGGGATGgtatgcatga ... gttgttgtagGCGTACCTTTCATCGTGAAAGCTGGGAAGGCGTTGGATGCTAAAAAAGTCG
EST: TCCTACTTTTGCATCTCTTGCTCTTCGTATCAACAACGAACGCTGGGATG GCGTACCTTTCATCGTGAAAGCTGGGAAAGCGTTGGATGCTAAGAAAGTCGEST: gi|208380876|gb|DC923358.1|DC923358
genomic: TCCTACTTTTGCATCTCTTGCTCTTCGTATCAACAACGAACGCTGGGATGgtatgcatga ... gttgttgtagGCGTACCTTTCATCGTGAAAGCTGGGAAGGCGTTGGATGCTAAAAAAGTCG
EST: TCCTACTTTTGCATCTCTTGCTCTTCGTATCAACAACGAACGCTGGGATG GCGTACCTTTCATCGTGAAAGCTGGGAAGGCGTTGGATGCTAAAAAAGTCGEST: gi|208398370|gb|DC912327.1|DC912327
genomic: TCCTACTTTTGCATCTCTTGCTCTTCGTATCAACAACGAACGCTGGGATGgtatgcatga ... gttgttgtagGCGTACCTTTCATCGTGAAAGCTGGGAAGGCGTTGGATGCTAAAAAAGTCG
EST: TCCTACTTTTGCATCTCTTGCTCTTCGTATCACCAACGAACGCTGGGATG GCGTACCTTTCATCGTGAAAGCTGGGAAGGCGTTGGATGCTAAAAA-GTCN
genomic: TCCTACTTTTGCATCTCTTGCTCTTCGTATCAACAACGAACGCTGGGATGgtatgcatga ... gttgttgtagGCGTACCTTTCATCGTGAAAGCTGGGAAGGCGTTGGATGCTAAAAAAGTCG
gaattgaattctccttcacgttgttttgacgtgaggttttttctggttgttgtagGCGTACCTTTCATCGTGAAAGCTGGGAAGGCGTTGGATGCTAAAAAAGTCGAAATACGTGTGCAGTTTAGGGACACTCCTGGTGACATCTTTAATT
ttttgac putative branch site (score: 3)
ttttttct TA-rich tract