1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
gtgagctgccgatcaatactctactccttgtattcttcctatgtggagagaaaatcatgcaaatagttgattagtgctcattgagaccttgataagcttggggtgaaaccttgagcacttctaccctccctaattgccccgtttacccctctgacaattttttgttgtggattcagGCTGCCCCGCAAACCATCACCATCAGCTTCTTAAGGATGTCTAAGTCCTGGGGCTCCTGTGTGCACAACTGGCTTCTTCCTACCCTAAAGACTCCGAAGC
species | Physcomitrella patens |
transcript | PP1S70_198V6.3 |
intron # | 11 |
splice site | 3' |
intron type | U2 |
EST: AGTGGGCGGGCGTTGAATGCCATGTTGAATTATATTGAAAGAAGCAGATC GCTGCCCCGCAAACCATCACCATCAGCTTCTTAAGGATGTCTAAGTCCTGGEST: gi|37833404|gb|BJ591416.1|BJ591416
genomic: AGTGGGCGGGCGTTGAATGCCATGTTGAATTATATTGAAAGAAGCAGATCgtgagctgcc ... gtggattcagGCTGCCCCGCAAACCATCACCATCAGCTTCTTAAGGATGTCTAAGTCCTGG
EST: AGTGGGCGGGCGTTGAATGCCATGTTGAATTATATTGAAAGAAGCAGATC GCTGCCCCGCAAACCATCACCATCAGCTTCTTAAGGATGTCTAAGTCCTGGEST: gi|37833312|gb|BJ591324.1|BJ591324
genomic: AGTGGGCGGGCGTTGAATGCCATGTTGAATTATATTGAAAGAAGCAGATCgtgagctgcc ... gtggattcagGCTGCCCCGCAAACCATCACCATCAGCTTCTTAAGGATGTCTAAGTCCTGG
EST: AGTGGGCGGGCGTTGAATGCCATGTTGAATTATATTGAAAGAAGCAGATC GCTGCCCCGCAAACCATCACCATCAGCTTCTTAAGGATGTCTAAGTCCTGGEST: gi|37833413|gb|BJ591425.1|BJ591425
genomic: AGTGGGCGGGCGTTGAATGCCATGTTGAATTATATTGAAAGAAGCAGATCgtgagctgcc ... gtggattcagGCTGCCCCGCAAACCATCACCATCAGCTTCTTAAGGATGTCTAAGTCCTGG
EST: AGTGGGCGGGCGTTGAATGCCATGTTGAATTATATTGAAAGAAGCAGATC GCTGCCCCGCAAACCATCACCATCAGCTTCTTAAGGATGTCTAAGTCCTGGEST: gi|37833440|gb|BJ591452.1|BJ591452
genomic: AGTGGGCGGGCGTTGAATGCCATGTTGAATTATATTGAAAGAAGCAGATCgtgagctgcc ... gtggattcagGCTGCCCCGCAAACCATCACCATCAGCTTCTTAAGGATGTCTAAGTCCTGG
EST: AGTGGGCGGGCGTTGAATGCCATGTTGAATTATATTGAAAGAAGCAGATC GCTGCCCCGCAAACCATCACCATCAGCTTCTTAAGGATGTCTAAGTCCTGG
genomic: AGTGGGCGGGCGTTGAATGCCATGTTGAATTATATTGAAAGAAGCAGATCgtgagctgcc ... gtggattcagGCTGCCCCGCAAACCATCACCATCAGCTTCTTAAGGATGTCTAAGTCCTGG
taccctccctaattgccccgtttacccctctgacaattttttgttgtggattcagGCTGCCCCGCAAACCATCACCATCAGCTTCTTAAGGATGTCTAAGTCCTGGGGCTCCTGTGTGCACAACTGGCTTCTTCCTACCCTAAAGACTCCGAAGC
ctctgac putative branch site (score: 1)
aattttttgtt TA-rich tract