1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' |
...ttgaagaatcctacgtattacataatgcttgtaagtgtttcctcattttacttgtagtggttttgttggaagcttactcggatattgcctactcttgcagGAACATTTTCCCAAAGTTTACAACGATCCTATCACGCTCAAGTACATAG
species | Physcomitrella patens |
transcript | PP1S69_13V6.1 |
intron # | 11 |
splice site | 3' |
intron type | U2 |
EST: GCAATCGCCTTTTGCTTGACGTGGGTCTTTGGCTTTGTCAGAAGCTAAAG GAACATTTTCCCAAAGTTTACAACGATCCTATCACGCTCAAGTACATAGEST: gi|162268581|gb|FC443635.1|FC443635
genomic: GCAATCGCCTTTTGCTTGACGTGGGTCTTTGGCTTTGTCAGAAGCTAAAGgtatctttca ... actcttgcagGAACATTTTCCCAAAGTTTACAACGATCCTATCACGCTCAAGTACATAG
EST: GCAATCGCCTTTTGCTTGACGTGGGTCTTTGGCTTTGTCAGAAGCTAAAG GAACATTTTCCCAAAGTTTACAACGATCCTATCACGCTCAAGTACATAGEST: gi|67700067|gb|BJ960300.1|BJ960300
genomic: GCAATCGCCTTTTGCTTGACGTGGGTCTTTGGCTTTGTCAGAAGCTAAAGgtatctttca ... actcttgcagGAACATTTTCCCAAAGTTTACAACGATCCTATCACGCTCAAGTACATAG
EST: CTTTGTCAGAAGCTAAAG GAACATTTTCCCAAAGTTTACAACGATCCTATCACGCTCAAGTACATAG
genomic: CTTTGTCAGAAGCTAAAGgtatctttca ... actcttgcagGAACATTTTCCCAAAGTTTACAACGATCCTATCACGCTCAAGTACATAG
ttttacttgtagtggttttgttggaagcttactcggatattgcctactcttgcagGAACATTTTCCCAAAGTTTACAACGATCCTATCACGCTCAAGTACATAG
agcttac putative branch site (score: 3)
cctactctt putative PPT
ttttgtt TA-rich tract