1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' |
gtgatttactttatcctaagcattgctacagtatggttaccttctctgtatataactgataatgtcttggagacgaagatgatgatttatattctatgcagtaatctgttttgattctggagcccatacctgaacaattatcctaaaccttttcccagATTGGTTTTGAAGAGCATTGGTTACAAGTCAATTCCTATTCCTGGTCTGACTTTTGATCACCGTCAAG
species | Physcomitrella patens |
transcript | PP1S302_37V6.1 |
intron # | 11 |
splice site | 3' |
intron type | U2 |
EST: AAACCTCAACGAGCAGTTGGTACTGGGGAATTTGAGGAAGTATCGTGCGG ATTGGTTTTGAAGAGCATTGGTTACAAGTCAATTCCTATTCCTGGTCTGACEST: gi|13315111|gb|BG408718.1|BG408718
genomic: AAACCTCAACGAGCAGTTGGTACTGGGGAATTTGAGGAAGTATCGTGCGGgtgatttact ... cttttcccagATTGGTTTTGAAGAGCATTGGTTACAAGTCAATTCCTATTCCTGGTCTGAC
EST: AAACCTCAACGAGCAGTTGGTACTGGGGAATTTGAGGAAGTATCGTGCGG ATTGGTTTTGAAGAGCGTTGGTTACAAGTCAATTCCTATTCCTGGTCTGACEST: gi|208393787|gb|DC946081.1|DC946081
genomic: AAACCTCAACGAGCAGTTGGTACTGGGGAATTTGAGGAAGTATCGTGCGGgtgatttact ... cttttcccagATTGGTTTTGAAGAGCATTGGTTACAAGTCAATTCCTATTCCTGGTCTGAC
EST: AAACCTCAACGAGCAGTTGGTACTGGGGAATTTGAGGAAGTATCGTGCGG ATTGGTTTTGAAGAGCATTGGTTACAAGTCAATTCCTATTCCTGGTCTGAC
genomic: AAACCTCAACGAGCAGTTGGTACTGGGGAATTTGAGGAAGTATCGTGCGGgtgatttact ... cttttcccagATTGGTTTTGAAGAGCATTGGTTACAAGTCAATTCCTATTCCTGGTCTGAC
atctgttttgattctggagcccatacctgaacaattatcctaaaccttttcccagATTGGTTTTGAAGAGCATTGGTTACAAGTCAATTCCTATTCCTGGTCTGACTTTTGATCACCGTCAAG
tcctaaa putative branch site (score: 9)
ccttttccc CT-rich tract
aacaattat TA-rich tract