1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' | 17 5' 3' | 18 5' 3' | 19 5' 3' |
gtatgtactgacaaacatttctgtaagaacaactgtacattctgcaattctggttgaaattgttttgaagtctgggttttgatgtaccaatctttcaacttgtgtagGTTATCACCGAAGCATTGCCCAAGTCCGTTGGTCCTAATCTTATCGGTTTGGTCACTTCTCGGGATGAGATTCCGGACCTTCTTAAG
species | Physcomitrella patens |
transcript | PP1S22_40V6.2 |
intron # | 11 |
splice site | 3' |
intron type | U2 |
EST: TGCTGAAGGGCGGGAAGGAAGCAGCACGATCGAATGCTATCCTACATAAG GTTATCACCGAAGCATTGCCCAAGTCCGTTGGTCCTAATCTTATCGGTTTGEST: gi|162191467|gb|FC367171.1|FC367171
genomic: TGCTGAAGGGCGGGAAGGAAGCAGCACGATCGAATGCTATCCTACATAAGgtatgtactg ... acttgtgtagGTTATCACCGAAGCATTGCCCAAGTCCGTTGGTCCTAATCTTATCGGTTTG
EST: TGCTGAAGGGCGGGAAGGAAGCAGCACGATCGAATGCTATCCTACATAAG GTTATCACCGAAGCATTGCCCAAGTCCGTTGGTCCTAATCTTATCGGTTTGEST: gi|162210539|gb|FC386835.1|FC386835
genomic: TGCTGAAGGGCGGGAAGGAAGCAGCACGATCGAATGCTATCCTACATAAGgtatgtactg ... acttgtgtagGTTATCACCGAAGCATTGCCCAAGTCCGTTGGTCCTAATCTTATCGGTTTG
EST: TGCTGAAGGGCGGGAAGGAAGCAGCACGATCGAATGCTATCCTACATAAG GTTATCACCGAAGCATTGCCCAAGTCCGTTGGTCCTAATCTTATCGGTTTGEST: gi|162167791|gb|FC344521.1|FC344521
genomic: TGCTGAAGGGCGGGAAGGAAGCAGCACGATCGAATGCTATCCTACATAAGgtatgtactg ... acttgtgtagGTTATCACCGAAGCATTGCCCAAGTCCGTTGGTCCTAATCTTATCGGTTTG
EST: TGCTGAAGGGCGGGAAGGAAGCAGCACGATCGAATGCTATCCTACATAAG GTTATCACCGAAGCATTGCCCAAGTCCGTTGGTCCTAATCTTATCGGTTTGEST: gi|162235436|gb|FC411571.1|FC411571
genomic: TGCTGAAGGGCGGGAAGGAAGCAGCACGATCGAATGCTATCCTACATAAGgtatgtactg ... acttgtgtagGTTATCACCGAAGCATTGCCCAAGTCCGTTGGTCCTAATCTTATCGGTTTG
EST: TGCTGAAGGGCGGGAAGGAAGCAGCACGATCGAATGCTATCCTACATAAG GTTATCACCGAAGCATTGCCCAAGTCCGTTGGTCCTAATCTTATCGGTTTG
genomic: TGCTGAAGGGCGGGAAGGAAGCAGCACGATCGAATGCTATCCTACATAAGgtatgtactg ... acttgtgtagGTTATCACCGAAGCATTGCCCAAGTCCGTTGGTCCTAATCTTATCGGTTTG
gttgaaattgttttgaagtctgggttttgatgtaccaatctttcaacttgtgtagGTTATCACCGAAGCATTGCCCAAGTCCGTTGGTCCTAATCTTATCGGTTTGGTCACTTCTCGGGATGAGATTCCGGACCTTCTTAAG
ttttgat putative branch site (score: 29)
aattgtttt TA-rich tract