1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' | 17 5' 3' |
gtaaaactagcatgagatatctgatatgttaaagcattttacagcggtgaagaaattaacgactttgtctatcacatcaaaagttaacatggctttcgtagaacgtatacatgctcagagtggttaaacttaatttgtggtgttttataatcagCATCCTGGAACCACTATTGTCACAGACAGTGTGACCTCGGATGGCCTTACGACTTTCATTGAACAGAAACTGG
species | Physcomitrella patens |
transcript | PP1S152_87V6.2 |
intron # | 11 |
splice site | 3' |
intron type | U2 |
EST: TGAATCGCAACCGCCTTATTGCTCTTCTGGCTGCAATTGTGTTGGAGCAG CATCCTGGAACCACTATTGTCACAGACAGTGTGACCTCGGATGGCCTTACGEST: gi|162215700|gb|FC391415.1|FC391415
genomic: TGAATCGCAACCGCCTTATTGCTCTTCTGGCTGCAATTGTGTTGGAGCAGgtaaaactag ... ttataatcagCATCCTGGAACCACTATTGTCACAGACAGTGTGACCTCGGATGGCCTTACG
EST: TGAATCGCAACCGCCTTATTGCTCTTCTGGCTGCAATTGTGTTGGAGCAG CATCCTGGAACCACTATTGTCACAGACAGTGTGACCTCGGATGGCCTTACG
genomic: TGAATCGCAACCGCCTTATTGCTCTTCTGGCTGCAATTGTGTTGGAGCAGgtaaaactag ... ttataatcagCATCCTGGAACCACTATTGTCACAGACAGTGTGACCTCGGATGGCCTTACG
agaacgtatacatgctcagagtggttaaacttaatttgtggtgttttataatcagCATCCTGGAACCACTATTGTCACAGACAGTGTGACCTCGGATGGCCTTACGACTTTCATTGAACAGAAACTGG
acttaat putative branch site (score: 4)
ttaaacttaatttgt TA-rich tract