1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
...tgttcttgtctgtttgaaaatgaattatcagaaatttgtaaccagtgattgtcattaagtagtagtttatgtctgatttgagtggaatgatttttttcagGTATCATTAATCGAGATGGTTTCTTTGGACTGTATCGTGGTTTTGTTCCAAACGTGCTGAAAAACCTTCCTAACAGCAG
species | Physcomitrella patens |
transcript | PP1S52_69V6.3 |
intron # | 10 |
splice site | 3' |
intron type | U2 |
EST: AATGCAAATGAAGGGCTCGCCTTTCAACTCTTTTATGGATGCAATTCCAG GTATCATTAATCGAGATGGTTTCTTTGGACTGTATCGTGGTTTTGTTCCAAEST: gi|67698876|gb|BJ959109.1|BJ959109
genomic: AATGCAAATGAAGGGCTCGCCTTTCAACTCTTTTATGGATGCAATTCCAGgttttcccac ... tttttttcagGTATCATTAATCGAGATGGTTTCTTTGGACTGTATCGTGGTTTTGTTCCAA
EST: AATGCAAATGAAGGGCTCGCCTTTCAACTCTTTTATGGATGCAATTCCAG GTATCATTAATCGAGATGGTTTCTTTGGACTGTATCGTGGTTTTGTTCCAA
genomic: AATGCAAATGAAGGGCTCGCCTTTCAACTCTTTTATGGATGCAATTCCAGgttttcccac ... tttttttcagGTATCATTAATCGAGATGGTTTCTTTGGACTGTATCGTGGTTTTGTTCCAA
tgattgtcattaagtagtagtttatgtctgatttgagtggaatgatttttttcagGTATCATTAATCGAGATGGTTTCTTTGGACTGTATCGTGGTTTTGTTCCAAACGTGCTGAAAAACCTTCCTAACAGCAG
gtctgat putative branch site (score: 4)
tttttttc putative PPT
aatgatttttttca TA-rich tract