1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
...ggattttgaatattggttcgttgtgacggtaggttatatgtgaaagaattgtctgtaagtacgtttgtacgttaactgactggttatgagagttatgcagTTGGAAGCTTGCGTGCATCCGTTTTTTGACGAGCTTCGGGACCTCAACTGCCGTTTACCAAATGGGCGGCCACTTCCCCCGTTGTTCAACTTCAAACCTC
species | Physcomitrella patens |
transcript | PP1S52_55V6.1 |
intron # | 10 |
splice site | 3' |
intron type | U2 |
EST: TCTGCGGTGCAACGCT TTGGAAGCTTGCGTGCATCCG-TTTTTGACGAGCTTCGGGACCTCAACTGCEST: gi|162199399|gb|FC373740.1|FC373740
genomic: TCTGCGGTGCAACGCTgtgagtaata ... agttatgcagTTGGAAGCTTGCGTGCATCCGTTTTTTGACGAGCTTCGGGACCTCAACTGC
EST: ACCTGGTTTCAAGACTGCTACAGTACTCCCCAAATCTGCGGTGCAACGCT TTGGAAGCTTGCGTGCATCCGTTTTTTGACGAGCTTCGGGACCTCAACTGCEST: gi|37821762|gb|BJ579828.1|BJ579828
genomic: ACCTGGTTTCAAGACTGCTACAGTACTCCCCAAATCTGCGGTGCAACGCTgtgagtaata ... agttatgcagTTGGAAGCTTGCGTGCATCCGTTTTTTGACGAGCTTCGGGACCTCAACTGC
EST: CCTGGTTTCAAGACTGCTACAGTACTCCCCAAATTCTGCGGTGCAACGCT TTGGAAGCTTGCGTGCATCCGTTTTTTGACGAGCTTCGGGACCTCAACTGC
genomic: CCTGGTTTCAAGACTGCTACAGTACTCCCCAAA-TCTGCGGTGCAACGCTgtgagtaata ... agttatgcagTTGGAAGCTTGCGTGCATCCGTTTTTTGACGAGCTTCGGGACCTCAACTGC
gaattgtctgtaagtacgtttgtacgttaactgactggttatgagagttatgcagTTGGAAGCTTGCGTGCATCCGTTTTTTGACGAGCTTCGGGACCTCAACTGCCGTTTACCAAATGGGCGGCCACTTCCCCCGTTGTTCAACTTCAAACCTC
aactgac putative branch site (score: 17)