1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' |
...gacttgagaaggcagacttaatattacacccaagtttggataatgttgttgcttggtttacaaattgatttcttttcttgggtgtatctacattcaacagCTGTTAATTAGCCACTCCATAAAACACGAGCACGAACGTGACGCCCAAGCAGCAGCCTTGGCGGAGTGCCAGAGAACCATTCTAGCGCTAGGAAAGCACA
species | Physcomitrella patens |
transcript | PP1S49_212V6.1 |
intron # | 10 |
splice site | 3' |
intron type | U2 |
EST: CGTCCAGTCACTCAACTTCCGAAGAAGACGAAGATACAAAATCTGTTAAG CTGTTAATTAGCCACTCCATAAAACACGAGCACGAACGTGACGCCCAAGCA
genomic: CGTCCAGTCACTCAACTTCCGAAGAAGACGAAGATACAAAATCTGTTAAGgtaccttact ... cattcaacagCTGTTAATTAGCCACTCCATAAAACACGAGCACGAACGTGACGCCCAAGCA
ttgttgcttggtttacaaattgatttcttttcttgggtgtatctacattcaacagCTGTTAATTAGCCACTCCATAAAACACGAGCACGAACGTGACGCCCAAGCAGCAGCCTTGGCGGAGTGCCAGAGAACCATTCTAGCGCTAGGAAAGCACA
aattgat putative branch site (score: 4)
tttacaaattgattt TA-rich tract