1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' |
...tggacagatggcccgtgttttcatatctctgtccatttttatgacctatattattctttttgcaaagttaacctttgaattcaacatcgtgatttggtagGTCCATTCCGAGTACTACGAGATCGTGAATGACGTCATCAGCACACAGTTTATGTTCTCCATACCTCTGGACGGTCCTGCATCTATGGTTACCCCTGTGT
species | Physcomitrella patens |
transcript | PP1S49_136V6.1 |
intron # | 10 |
splice site | 3' |
intron type | U2 |
EST: ATCCAGCATCTATACACCCTTCCCGCAAAAATTCCTCAACAATTACAAAG GTCCATTCCGAGTACTACGAGATCGTGAATGACGTCATCAGCACACAGTTT
genomic: ATCCAGCATCTATACACCCTTCCCGCAAAAATTCCTCAACAATTACAAAGgtattcgaat ... gatttggtagGTCCATTCCGAGTACTACGAGATCGTGAATGACGTCATCAGCACACAGTTT
ctatattattctttttgcaaagttaacctttgaattcaacatcgtgatttggtagGTCCATTCCGAGTACTACGAGATCGTGAATGACGTCATCAGCACACAGTTTATGTTCTCCATACCTCTGGACGGTCCTGCATCTATGGTTACCCCTGTGT
agttaac putative branch site (score: 6)
ttattcttttt TA-rich tract