1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
gtaagatggaaggcctttccacctccatcaatgctgcagcgtattattttttcttgaagtcattgctcaactatttaaagttttggagagtaatggaatttgtagaaaatattctcaattattattcatagagggctttgattactcttctaatgggatcaagcacgtactaccaatactattcttttggtgcagGATCGAGAGGTGGTGCGAGTTATTGTGGAGTGTTGTATGCAGGAGCGGGCATACAACCCTTACTATGCTTTGATAGTAACGAGGCTCTGCAACCACGACA
species | Physcomitrella patens |
transcript | PP1S47_223V6.1 |
intron # | 10 |
splice site | 3' |
intron type | U2 |
EST: GTGTAGATGCATTTGAGAAGATTTTGCGGCTGAAGCTGCCTGGAAAGCAA GATCGAGAGGTGGTGCGAGTTATTGTGGAGTGTTGTATGCAGGAGCGGGCAEST: gi|37821230|gb|BJ579296.1|BJ579296
genomic: GTGTAGATGCATTTGAGAAGATTTTGCGGCTGAAGCTGCCTGGAAAGCAAgtaagatgga ... tttggtgcagGATCGAGAGGTGGTGCGAGTTATTGTGGAGTGTTGTATGCAGGAGCGGGCA
EST: GTGTAGATGCATTTGAGAAGATTTTGCGGCTGAAGCTGCCTGGAAAGCAA GATCGAGAGGTGGTGCGAGTTATTGTGGAGTGTTGTATGCAGGAGCGGGCA
genomic: GTGTAGATGCATTTGAGAAGATTTTGCGGCTGAAGCTGCCTGGAAAGCAAgtaagatgga ... tttggtgcagGATCGAGAGGTGGTGCGAGTTATTGTGGAGTGTTGTATGCAGGAGCGGGCA
attactcttctaatgggatcaagcacgtactaccaatactattcttttggtgcagGATCGAGAGGTGGTGCGAGTTATTGTGGAGTGTTGTATGCAGGAGCGGGCATACAACCCTTACTATGCTTTGATAGTAACGAGGCTCTGCAACCACGACA
ttctaat putative branch site (score: 4)
ctattctttt putative PPT
aatactattctttt TA-rich tract