1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' | 17 5' 3' | 18 5' 3' |
gtatgtctacgaagcattgaaaacatgtactcttgaccgattccgttctgttcaggttgtgtgtaaaaatatcgatttttcagcccgggacttggaatttgtgaccggatcattccttactgtatgctgttgctacagGATATCAAGAAGGTACCTGAAGACATCAAAGAATTGAAACCAACATTGTTTGTTGGTGTTCCTCGTGTCTTCGACAGGCTAACTACAG
species | Physcomitrella patens |
transcript | PP1S47_161V6.2 |
intron # | 10 |
splice site | 3' |
intron type | U2 |
EST: CTGAGGAGATGTTTGTTTTTATTGGCGGTTCTATTGGATTCTGGCAAGGG GATATCAAGAAGGTACCTGAAGACATCAAAGAATTGAAACCAACATTGTTTEST: gi|162194189|gb|FC371040.1|FC371040
genomic: CTGAGGAGATGTTTGTTTTTATTGGCGGTTCTATTGGATTCTGGCAAGGGgtatgtctac ... gttgctacagGATATCAAGAAGGTACCTGAAGACATCAAAGAATTGAAACCAACATTGTTT
EST: CTGAGGAGATGTTTGTTTTTATTGGCGGTTCTATTGGATTCTGGCAAGGG GATATCAAGAAGGTACCTGAAGACATCAAEST: gi|162151930|gb|FC328891.1|FC328891
genomic: CTGAGGAGATGTTTGTTTTTATTGGCGGTTCTATTGGATTCTGGCAAGGGgtatgtctac ... gttgctacagGATATCAAGAAGGTACCTGAAGACATCAA
EST: CTGAGGAGATGTTTGTTTTTATTGGCGGTTCTATTGGATTCTGGCAAGGG GATATCAAGAAGGTACCTGAAGACATCAAAGAATTGAAACCAACATTGTTT
genomic: CTGAGGAGATGTTTGTTTTTATTGGCGGTTCTATTGGATTCTGGCAAGGGgtatgtctac ... gttgctacagGATATCAAGAAGGTACCTGAAGACATCAAAGAATTGAAACCAACATTGTTT
cccgggacttggaatttgtgaccggatcattccttactgtatgctgttgctacagGATATCAAGAAGGTACCTGAAGACATCAAAGAATTGAAACCAACATTGTTTGTTGGTGTTCCTCGTGTCTTCGACAGGCTAACTACAG
tccttac putative branch site (score: 2)
aatttgt TA-rich tract