1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' |
gtactcccttattgacgtctcataactttaccctagtgatcttcgatacccggttatttacgttgtgaaatttttaaagttatgttccatcaagtcagaaattctaaaattttaaaatgaacgaatttttttttcttgtggtgttcgtagatgatctttgggcttgttgatcatgtagtaatccagaatgtttgtccagGTAGTTGAACAGTTCGGCATTCCGCATCTGTTCGAGCTCCCCATCAGACCGGAA
species | Physcomitrella patens |
transcript | PP1S414_7V6.1 |
intron # | 10 |
splice site | 3' |
intron type | U2 |
EST: AAGGTGATGATAAGCGCTATTATCCATTTGGAAAGGGTTCTGGTTCCAAG GTAGTTGAACAGTTCGGCATTCCGCATCTGTTCGAGCTCCCCATCAGACCGEST: gi|162198394|gb|FC372655.1|FC372655
genomic: AAGGTGATGATAAGCGCTATTATCCATTTGGAAAGGGTTCTGGTTCCAAGgtactccctt ... gtttgtccagGTAGTTGAACAGTTCGGCATTCCGCATCTGTTCGAGCTCCCCATCAGACCG
EST: AAGGTGATGATAAGCGCTATTATCCATTTGGAAAGGGTTCTGGTTCCAAG GTAGTTGAACAGTTCGGCATTCCGCATCTGTTCGAGCTCCCCATCAGACCGEST: gi|162198590|gb|FC374762.1|FC374762
genomic: AAGGTGATGATAAGCGCTATTATCCATTTGGAAAGGGTTCTGGTTCCAAGgtactccctt ... gtttgtccagGTAGTTGAACAGTTCGGCATTCCGCATCTGTTCGAGCTCCCCATCAGACCG
EST: AAGGTGATGATAAGCGCTATTATCCATTTGGAAAGGGTTCTGGTTCCAAG GTAGTTGAACAGTTCGGCATTCCGCATCTGTTCGAGCTCCCCATCAGACCG
genomic: AAGGTGATGATAAGCGCTATTATCCATTTGGAAAGGGTTCTGGTTCCAAGgtactccctt ... gtttgtccagGTAGTTGAACAGTTCGGCATTCCGCATCTGTTCGAGCTCCCCATCAGACCG
tcgtagatgatctttgggcttgttgatcatgtagtaatccagaatgtttgtccagGTAGTTGAACAGTTCGGCATTCCGCATCTGTTCGAGCTCCCCATCAGACCGGAA
tgttgat putative branch site (score: 5)
tttgtcc putative PPT
tagtaat TA-rich tract