1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' |
...aaatgaaaatattgttttgcttggttgatcaaatctcatgtatctggtgtaaaaatagaggctctatattaacatgtcttggacatgtcatgctttgcagGTATCGAAATTGTTTGAGGTGGTTCCTCCTATTCTTTTGGCAGGCGGAAAG
species | Physcomitrella patens |
transcript | PP1S37_33V6.1 |
intron # | 10 |
splice site | 3' |
intron type | U2 |
EST: AGCGTGAATTTGCACTTAAACATCTTCCCGAAGATCCCATGTTCAAGATG GTATCGAAATTGTTTGAGGTGGTTCCTCCTATTCTTTTGGCAGGCGGAAAGEST: gi|162165708|gb|FC340889.1|FC340889
genomic: AGCGTGAATTTGCACTTAAACATCTTCCCGAAGATCCCATGTTCAAGATGgtatgatttc ... tgctttgcagGTATCGAAATTGTTTGAGGTGGTTCCTCCTATTCTTTTGGCAGGCGGAAAG
EST: AGCGTGAATTTGCACTTAAACATCTTCCCGAAGATCCCATGTTCAAGATG GTATCGAAATTGTTTGAGGTGGTTCCTCCTATTCTTTTGGCAGGCGGAAAGEST: gi|208386538|gb|DC952747.1|DC952747
genomic: AGCGTGAATTTGCACTTAAACATCTTCCCGAAGATCCCATGTTCAAGATGgtatgatttc ... tgctttgcagGTATCGAAATTGTTTGAGGTGGTTCCTCCTATTCTTTTGGCAGGCGGAAAG
EST: AGCGTGAATTTGCACTTAAACATCTTCCCGAAGATCCCATGTTCAAGATG GTATCGAAATTGTTTGAGGTGGTTCCTCCTATTCTTTTGGCAGGCGGAAAGEST: gi|67697462|gb|BJ957695.1|BJ957695
genomic: AGCGTGAATTTGCACTTAAACATCTTCCCGAAGATCCCATGTTCAAGATGgtatgatttc ... tgctttgcagGTATCGAAATTGTTTGAGGTGGTTCCTCCTATTCTTTTGGCAGGCGGAAAG
EST: AGCGTGAATTTGCACTTAAACATCTTCCCGAAGATCCCATGTTCAAGATG GTATCGAAATTGTTTGAGGTGGTTCCTCCTATTCTTTTGGCAGGCGGAAAGEST: gi|37823157|gb|BJ581223.1|BJ581223
genomic: AGCGTGAATTTGCACTTAAACATCTTCCCGAAGATCCCATGTTCAAGATGgtatgatttc ... tgctttgcagGTATCGAAATTGTTTGAGGTGGTTCCTCCTATTCTTTTGGCAGGCGGAAAG
EST: AGCGTGAATTTGCACTTAAACATCTTCCCGAAGATCCCATGTTCAAGATG GTATCGAAATTGTTTGAGGTGGTTCCTCCTATTCTTTTGGCAGGCGGAAAGEST: gi|208388659|gb|DC953435.1|DC953435
genomic: AGCGTGAATTTGCACTTAAACATCTTCCCGAAGATCCCATGTTCAAGATGgtatgatttc ... tgctttgcagGTATCGAAATTGTTTGAGGTGGTTCCTCCTATTCTTTTGGCAGGCGGAAAG
EST: AGCGTGAATTTGCACTTAAACATCTTCCCGAAGATCCCATGTTCAAGATG GTATCGAAATTGTTTGAGGTGGTTCCTCCTATTCTTTTGGCAGGCGGAAAGEST: gi|208363044|gb|DC957985.1|DC957985
genomic: AGCGTGAATTTGCACTTAAACATCTTCCCGAAGATCCCATGTTCAAGATGgtatgatttc ... tgctttgcagGTATCGAAATTGTTTGAGGTGGTTCCTCCTATTCTTTTGGCAGGCGGAAAG
EST: AGCGTGAATTTGCACTTAAACATCTTCCCGAAGATCCCATGTTCAAGATG GTATCGAAATNGTTTGAGGTGGTTCCTCCTATTCTTTTGGCAGGCGGAAAGEST: gi|37847922|gb|BJ605930.1|BJ605930
genomic: AGCGTGAATTTGCACTTAAACATCTTCCCGAAGATCCCATGTTCAAGATGgtatgatttc ... tgctttgcagGTATCGAAATTGTTTGAGGTGGTTCCTCCTATTCTTTTGGCAGGCGGAAAG
EST: AGCGTGAATTTGCACTTAAACATCTTCCCGAAGATCCCATGTTCAAGATG GTATCGAAATTGTTTGAGGTGGTTCCTCCTATTCTTTTGGCAGGCGGAAAGEST: gi|37835509|gb|BJ593521.1|BJ593521
genomic: AGCGTGAATTTGCACTTAAACATCTTCCCGAAGATCCCATGTTCAAGATGgtatgatttc ... tgctttgcagGTATCGAAATTGTTTGAGGTGGTTCCTCCTATTCTTTTGGCAGGCGGAAAG
EST: AGCGTGAATTTGCACTTAAACATCTTCCCGAAGATCCCATGTTCAAGATG GTATCGAAATTGTTTGAGGTGGTTCCTCCTATTCTTTTGGCAGGCGGAAAGEST: gi|162152561|gb|FC328839.1|FC328839
genomic: AGCGTGAATTTGCACTTAAACATCTTCCCGAAGATCCCATGTTCAAGATGgtatgatttc ... tgctttgcagGTATCGAAATTGTTTGAGGTGGTTCCTCCTATTCTTTTGGCAGGCGGAAAG
EST: AGCGTGAATTTGCACTTAAACATCTTCCCGAAGATCCCATGTTCAAGATG GTATCGAAATTGTTTGAGGTGGTTCCTCCTATTCTTTTGGCAGGCGGAAAGEST: gi|67724660|gb|BJ974919.1|BJ974919
genomic: AGCGTGAATTTGCACTTAAACATCTTCCCGAAGATCCCATGTTCAAGATGgtatgatttc ... tgctttgcagGTATCGAAATTGTTTGAGGTGGTTCCTCCTATTCTTTTGGCAGGCGGAAAG
EST: AGCGTGAATTTGCACTTAAACATCTTCCCGAAGATCCCATGTTCAAGATG GTATCGAAATTGTTTGAGGTGGTTCCTCCTATTCTTTTGGCAGGCGGAAAGEST: gi|162194037|gb|FC370212.1|FC370212
genomic: AGCGTGAATTTGCACTTAAACATCTTCCCGAAGATCCCATGTTCAAGATGgtatgatttc ... tgctttgcagGTATCGAAATTGTTTGAGGTGGTTCCTCCTATTCTTTTGGCAGGCGGAAAG
EST: AGCGTGAATTTGCACTTAAACATCTTCCCGAAGATCCCATGTTCAAGATG GTATCGAAATTGTTTGAGGTGGTTCCTCCTATTCTTTTGGCAGGCGGAAAGEST: gi|208356950|gb|DC922286.1|DC922286
genomic: AGCGTGAATTTGCACTTAAACATCTTCCCGAAGATCCCATGTTCAAGATGgtatgatttc ... tgctttgcagGTATCGAAATTGTTTGAGGTGGTTCCTCCTATTCTTTTGGCAGGCGGAAAG
EST: AGCGTGAATTTGCACTTAAACATCTTCCCGAAGATCCCATGTTCAAGATG GTATCGAAATTGTTTGAGGTGGTTCCTCCTATTCTTTTGGCAGGCGGAAAGEST: gi|162234310|gb|FC409848.1|FC409848
genomic: AGCGTGAATTTGCACTTAAACATCTTCCCGAAGATCCCATGTTCAAGATGgtatgatttc ... tgctttgcagGTATCGAAATTGTTTGAGGTGGTTCCTCCTATTCTTTTGGCAGGCGGAAAG
EST: AGCGTGAATTTGCACTTAAACATCTTCCCGAAGATCCCATGTTCAAGATG GTATCGAAATTGTTTGAGGTGGTTCCTCCTATTCTTTTGGCAGGCGGAAAGEST: gi|37825198|gb|BJ583264.1|BJ583264
genomic: AGCGTGAATTTGCACTTAAACATCTTCCCGAAGATCCCATGTTCAAGATGgtatgatttc ... tgctttgcagGTATCGAAATTGTTTGAGGTGGTTCCTCCTATTCTTTTGGCAGGCGGAAAG
EST: AGCGTGAATTTGCACTTAAACATCTTCCCGAAGATCCCATGTTCAAGATG GTATCGAAATTGTTTGAGGTGGTTCCTCCTATTCTTTTGGCAGGCGGAAAGEST: gi|162202112|gb|FC378033.1|FC378033
genomic: AGCGTGAATTTGCACTTAAACATCTTCCCGAAGATCCCATGTTCAAGATGgtatgatttc ... tgctttgcagGTATCGAAATTGTTTGAGGTGGTTCCTCCTATTCTTTTGGCAGGCGGAAAG
EST: AGCGTGAATTTGCACTTAAACATCTTCCCGAAGATCCCATGTTCAAGATG GTATCGAAATTGTTTGAGGTGGTTCCTCCTATTCTTTTGGCAGGCGGAAAG
genomic: AGCGTGAATTTGCACTTAAACATCTTCCCGAAGATCCCATGTTCAAGATGgtatgatttc ... tgctttgcagGTATCGAAATTGTTTGAGGTGGTTCCTCCTATTCTTTTGGCAGGCGGAAAG
ggtgtaaaaatagaggctctatattaacatgtcttggacatgtcatgctttgcagGTATCGAAATTGTTTGAGGTGGTTCCTCCTATTCTTTTGGCAGGCGGAAAG
tattaac putative branch site (score: 1)
tatattaacat TA-rich tract