1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' |
gtattcatctctctatacatcacgttggagtaatttaggaacttgaccgcttcattatgggaagaatccgtttctgaagaataataggcgtgattgttaataatactttggtgccgcgatattacagGTTATGGAGTTTTTGCGCAGGCTTGTGGACTGGAAAAAGTAAATACAGGATCCAAGCAGCATTCGAAACAACATTCAAATAGATTATTACTGCACCCAGA
species | Physcomitrella patens |
transcript | PP1S333_42V6.1 |
intron # | 10 |
splice site | 3' |
intron type | U2 |
EST: CTGTCGTTAAACCAACTGAAGCAAAGTTCTCGCTTCGTGATCCATTGGAG GTTATGGAGTTTTTGCGCAGGCTTGTGGACTGGAAAAAGTAAATACAGGATEST: gi|162151631|gb|FC327760.1|FC327760
genomic: CTGTCGTTAAACCAACTGAAGCAAAGTTCTCGCTTCGTGATCCATTGGAGgtattcatct ... gatattacagGTTATGGAGTTTTTGCGCAGGCTTGTGGACTGGAAAAAGTAAATACAGGAT
EST: CTGTCGTTAAACCAACTGAAGCAAAGTTCTCGCTTCGTGATCCATTGGAG GTTATGGAGTTTTTGCGCAGGCTTGTGGACTGGAAAAAGTAAATACAGGAT
genomic: CTGTCGTTAAACCAACTGAAGCAAAGTTCTCGCTTCGTGATCCATTGGAGgtattcatct ... gatattacagGTTATGGAGTTTTTGCGCAGGCTTGTGGACTGGAAAAAGTAAATACAGGAT
tctgaagaataataggcgtgattgttaataatactttggtgccgcgatattacagGTTATGGAGTTTTTGCGCAGGCTTGTGGACTGGAAAAAGTAAATACAGGATCCAAGCAGCATTCGAAACAACATTCAAATAGATTATTACTGCACCCAGA
tgttaat putative branch site (score: 2)
attgttaataatactt TA-rich tract