1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' |
...caatgaattgttaggcgttgaccacagtgtggcccatgtattgagttttacgtatactactgtctgttatttatggctagtatgtgctatcttgatgcagGACAACAGAATTTTCCATTCACATTTTCCCGTCGATCGTGAACTTCAGGGTTATGTGCTCGTCTTCAAACGAACTCCAAAGACTCCTTCTGATCACACAA
species | Physcomitrella patens |
transcript | PP1S32_143V6.1 |
intron # | 10 |
splice site | 3' |
intron type | U2 |
EST: CAATGGAGAAGCATATAAGCGCGTTCTTTCAGGCGGAAGGTTATGTACTG GACAACAGAATTTTCCATTCACATTTTCCCGTCGATCGTGAACTTCAGGGTEST: gi|37835410|gb|BJ593422.1|BJ593422
genomic: CAATGGAGAAGCATATAAGCGCGTTCTTTCAGGCGGAAGGTTATGTACTGgtacatttct ... cttgatgcagGACAACAGAATTTTCCATTCACATTTTCCCGTCGATCGTGAACTTCAGGGT
EST: CAATGGAGAAGCATATAAGCGCGTTCTTTCAGGCGGAAGGTTATGTACTG GACAACAGAATTTTCCATTCACATTTTCCCGTCGATCGTGAACTTCAGGGTEST: gi|208355107|gb|DC922209.1|DC922209
genomic: CAATGGAGAAGCATATAAGCGCGTTCTTTCAGGCGGAAGGTTATGTACTGgtacatttct ... cttgatgcagGACAACAGAATTTTCCATTCACATTTTCCCGTCGATCGTGAACTTCAGGGT
EST: CAATGGAGAAGCATATAAGCGCGTTCTTTCAGGCGGAAGGTTATGTACTG GACAACAGAATTTTCCATTCACATTTTCCCGTCGATCGTGAACTTCAGGGT
genomic: CAATGGAGAAGCATATAAGCGCGTTCTTTCAGGCGGAAGGTTATGTACTGgtacatttct ... cttgatgcagGACAACAGAATTTTCCATTCACATTTTCCCGTCGATCGTGAACTTCAGGGT
ttttacgtatactactgtctgttatttatggctagtatgtgctatcttgatgcagGACAACAGAATTTTCCATTCACATTTTCCCGTCGATCGTGAACTTCAGGGTTATGTGCTCGTCTTCAAACGAACTCCAAAGACTCCTTCTGATCACACAA
tcttgat putative branch site (score: 1)
ctatctt CT-rich tract
tgttatttat TA-rich tract