1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' |
gtttgtcaacattttgttattttctgttaataaattactttaatttttatctttaataaactgttgatcctcattcaattcgtatgtttggtgttgacgaatcttgttcaatacttattagtaagtgaaattgtgagagccaaccaattgtggtatctaatcatatgtgcgttgatatggtgacagCCACATTCTCCAGACAACAGGGGTTTGGCTCGAGAGTGCAAGGATGTTAAGATTGACCGCGTTTACATTGGGTCATGCACTGGTGGAAAGACTGAAGATT
species | Physcomitrella patens |
transcript | PP1S227_66V6.1 |
intron # | 10 |
splice site | 3' |
intron type | U2 |
EST: TACAAGAATACAGATTTGACGTCTCAAAGCTGGAGCCTCTTGTAGCCAAG CCACATTCTCCAGACAACAGGGGTTTGGCTCGAGAGTGCAAGGATGTTAAGEST: gi|162224564|gb|FC400460.1|FC400460
genomic: TACAAGAATACAGATTTGACGTCTCAAAGCTGGAGCCTCTTGTAGCCAAGgtttgtcaac ... atggtgacagCCACATTCTCCAGACAACAGGGGTTTGGCTCGAGAGTGCAAGGATGTTAAG
EST: CAAAGCTGGAGCCTCTTGTAGCCAAG CCACATTCTCCAGACAACAGGGGTTTGGCTCGAGAGTGCAAGGATGTTAAGEST: gi|208386457|gb|DC949130.1|DC949130
genomic: CAAAGCTGGAGCCTCTTGTAGCCAAGgtttgtcaac ... atggtgacagCCACATTCTCCAGACAACAGGGGTTTGGCTCGAGAGTGCAAGGATGTTAAG
EST: TACAAGAATACAGATTTGACGTCTCAAAGCTGGAGCCTCTTGTAGCCAAG CCACATTCTCCAGACAACAGGGGTTTGGCTCGAGAGTGCAAGGATGTTAAGEST: gi|162179912|gb|FC355983.1|FC355983
genomic: TACAAGAATACAGATTTGACGTCTCAAAGCTGGAGCCTCTTGTAGCCAAGgtttgtcaac ... atggtgacagCCACATTCTCCAGACAACAGGGGTTTGGCTCGAGAGTGCAAGGATGTTAAG
EST: TACAAGAATACAGATTTGACGTCTCAAAGCTGGAGCCTCTTGTAGCCAAG CCACATTCTCCAGACAACAGGGGTTTGGCTCGAGAGTGCAAGGATGTTAAGEST: gi|162198076|gb|FC372103.1|FC372103
genomic: TACAAGAATACAGATTTGACGTCTCAAAGCTGGAGCCTCTTGTAGCCAAGgtttgtcaac ... atggtgacagCCACATTCTCCAGACAACAGGGGTTTGGCTCGAGAGTGCAAGGATGTTAAG
EST: TACAAGAATACAGATTTGACGTCTCAAAGCTGGAGCCTCTTGTAGCCAAG CCACATTCTCCAGACAACAGGGGTTTGGCTCGAGAGTGCAAGGATGTTAAGEST: gi|100388195|gb|BY951797.1|BY951797
genomic: TACAAGAATACAGATTTGACGTCTCAAAGCTGGAGCCTCTTGTAGCCAAGgtttgtcaac ... atggtgacagCCACATTCTCCAGACAACAGGGGTTTGGCTCGAGAGTGCAAGGATGTTAAG
EST: TACAAGAATACAGATTTGACGTCTCAAAGCTGGAGCCTCTTGTAGCCAAG CCACATTCTCCAGACAACAGGGGTTTGGCTCGAGAGTGCAAGGATGTTAAGEST: gi|162190641|gb|FC367527.1|FC367527
genomic: TACAAGAATACAGATTTGACGTCTCAAAGCTGGAGCCTCTTGTAGCCAAGgtttgtcaac ... atggtgacagCCACATTCTCCAGACAACAGGGGTTTGGCTCGAGAGTGCAAGGATGTTAAG
EST: TACAAGAATACAGATTTGACGTCTCAAAGCTGGAGCCTCTTGTAGCCAAG CCACATTCTCCAGACAACAGGGGTTTGGCTCGAGAGTGCAAGGATGTTAAGEST: gi|162213332|gb|FC389620.1|FC389620
genomic: TACAAGAATACAGATTTGACGTCTCAAAGCTGGAGCCTCTTGTAGCCAAGgtttgtcaac ... atggtgacagCCACATTCTCCAGACAACAGGGGTTTGGCTCGAGAGTGCAAGGATGTTAAG
EST: TACAAGAATACAGATTTGACGTCTCAAAGCTGGAGCCTCTTGTAGCCAAG CCACATTCTCCAGACAACAGGGGTTTGGCTCGAGAGTGCAAGGATGTTAAGEST: gi|162278617|gb|FC455015.1|FC455015
genomic: TACAAGAATACAGATTTGACGTCTCAAAGCTGGAGCCTCTTGTAGCCAAGgtttgtcaac ... atggtgacagCCACATTCTCCAGACAACAGGGGTTTGGCTCGAGAGTGCAAGGATGTTAAG
EST: TACAAGAATACAGATTTGACGTCTCAAAGCTGGAGCCTCTTGTAGCCAAG CCACATTCTCCAGACAACAGGGGTTTGGCTCGAGAGTGCAAGGATGTTAAGEST: gi|7286764|gb|AW599251.1|AW599251
genomic: TACAAGAATACAGATTTGACGTCTCAAAGCTGGAGCCTCTTGTAGCCAAGgtttgtcaac ... atggtgacagCCACATTCTCCAGACAACAGGGGTTTGGCTCGAGAGTGCAAGGATGTTAAG
EST: TACAAGAATACAGATNTGACGTCTCANAGCTGGAGCCTCTTGTAGCCAAG CCACATTCTTCAGACAACEST: gi|37839307|gb|BJ597315.1|BJ597315
genomic: TACAAGAATACAGATTTGACGTCTCAAAGCTGGAGCCTCTTGTAGCCAAGgtttgtcaac ... atggtgacagCCACATTCTCCAGACAAC
EST: TACAAGAATACAGATTTGACGTCTCAAAGCTGGAGCNTCTTGTAGCCAAG CCACATTCTCCAGACAACAGGGGTTTGGCTCGAGAGTGCAAGGATGTTAAGEST: gi|162262853|gb|FC439272.1|FC439272
genomic: TACAAGAATACAGATTTGACGTCTCAAAGCTGGAGCCTCTTGTAGCCAAGgtttgtcaac ... atggtgacagCCACATTCTCCAGACAACAGGGGTTTGGCTCGAGAGTGCAAGGATGTTAAG
EST: TACAAGAATACAGATTTGACGTCTCAAAGCTGGAGCCTCTTGTAGCCAAG CCACATTCTCCAGACAACAGGGGTTTGGCTCGAGAGTGCAAGGATGTTAAGEST: gi|162243292|gb|FC415641.1|FC415641
genomic: TACAAGAATACAGATTTGACGTCTCAAAGCTGGAGCCTCTTGTAGCCAAGgtttgtcaac ... atggtgacagCCACATTCTCCAGACAACAGGGGTTTGGCTCGAGAGTGCAAGGATGTTAAG
EST: TACAAGAATACAGATTTGACGTCTCAAAGCTGGAGCCTCTTGTAGCCAAG CCACATTCTCCAGACAACAGGGGTTTGGCTCGAGAGTGCAAGGATGTTAAGEST: gi|162243293|gb|FC415642.1|FC415642
genomic: TACAAGAATACAGATTTGACGTCTCAAAGCTGGAGCCTCTTGTAGCCAAGgtttgtcaac ... atggtgacagCCACATTCTCCAGACAACAGGGGTTTGGCTCGAGAGTGCAAGGATGTTAAG
EST: TACAAGAATACAGATTTGACGTCTCAAAGCTGGAGCCTCTTGTAGCCAAG CCACATTCTCCAGACAACAGGGGTTTGGCTCGAGAGTGCAAGGATGTTAAGEST: gi|162275070|gb|FC450929.1|FC450929
genomic: TACAAGAATACAGATTTGACGTCTCAAAGCTGGAGCCTCTTGTAGCCAAGgtttgtcaac ... atggtgacagCCACATTCTCCAGACAACAGGGGTTTGGCTCGAGAGTGCAAGGATGTTAAG
EST: CGTCT-AAAGCTGGAGCCTCTTGTAGCCAAG CCACATTCTCCAGACAACAGGGGTTTGGCTCGAGAGTGCAAGGATGTTAAGEST: gi|208376475|gb|DC918920.1|DC918920
genomic: CGTCTCAAAGCTGGAGCCTCTTGTAGCCAAGgtttgtcaac ... atggtgacagCCACATTCTCCAGACAACAGGGGTTTGGCTCGAGAGTGCAAGGATGTTAAG
EST: TACAAGAATACAGATTTGACGTCTCAAAGCTGGAGCCTCTTGTAGCCAAG CCACATTCTCCAGACAACAGGGGTTTGGCTCGAGAGTGCAAGGATGTTAAGEST: gi|162213331|gb|FC389619.1|FC389619
genomic: TACAAGAATACAGATTTGACGTCTCAAAGCTGGAGCCTCTTGTAGCCAAGgtttgtcaac ... atggtgacagCCACATTCTCCAGACAACAGGGGTTTGGCTCGAGAGTGCAAGGATGTTAAG
EST: TACAAGAATACAGATTTGACGTCTCAAAGCTGGAGCCTCTTGTAGCCAAG CCACATTCTCCAGACAACAGGGGTTTGGCTCGAGAGTGCAAGGATGTTAAGEST: gi|162261368|gb|FC437801.1|FC437801
genomic: TACAAGAATACAGATTTGACGTCTCAAAGCTGGAGCCTCTTGTAGCCAAGgtttgtcaac ... atggtgacagCCACATTCTCCAGACAACAGGGGTTTGGCTCGAGAGTGCAAGGATGTTAAG
EST: TACAAGAATACAGATTTGACGTCTCAAAGCTGGAGCCTCTTGTAGCCAAG CCACATTCTCCAGACAACAGGGGTTTGGCTCGAGAGTGCAAGGATGTTAAGEST: gi|162261369|gb|FC437802.1|FC437802
genomic: TACAAGAATACAGATTTGACGTCTCAAAGCTGGAGCCTCTTGTAGCCAAGgtttgtcaac ... atggtgacagCCACATTCTCCAGACAACAGGGGTTTGGCTCGAGAGTGCAAGGATGTTAAG
EST: TACAAGAATACAGATTTGACGTCTCAAAGCTGGAGCCTCTTGTAGCCAAG CCACATTCTCCAGACAACAGGGGTTTGGCTCGAGAGTGCAAGGATGTTAAGEST: gi|208365347|gb|DC950790.1|DC950790
genomic: TACAAGAATACAGATTTGACGTCTCAAAGCTGGAGCCTCTTGTAGCCAAGgtttgtcaac ... atggtgacagCCACATTCTCCAGACAACAGGGGTTTGGCTCGAGAGTGCAAGGATGTTAAG
EST: TACAAGAATACAGATTTGACGTCTCAAAGCTGGAGCCTCTTGTAGCCAAG CCACATTCTCCAGACAACAGGGGTTTGGCTCGAGAGTGCAAGGATGTTAAGEST: gi|162272776|gb|FC447973.1|FC447973
genomic: TACAAGAATACAGATTTGACGTCTCAAAGCTGGAGCCTCTTGTAGCCAAGgtttgtcaac ... atggtgacagCCACATTCTCCAGACAACAGGGGTTTGGCTCGAGAGTGCAAGGATGTTAAG
EST: CTTGTAGCCAAG CCACATTCTCCAGACAACAGGGGTTTGGCTCGAGAGTGCAAGGATGTTAAGEST: gi|67725705|gb|BJ975964.1|BJ975964
genomic: CTTGTAGCCAAGgtttgtcaac ... atggtgacagCCACATTCTCCAGACAACAGGGGTTTGGCTCGAGAGTGCAAGGATGTTAAG
EST: TACAAGAATACAGATTTGACGTCTCAAAGCTGGAGCCTCTTGTAGCCAAG CCACATTCTCCAGACAACAGGGGTTTGGCTCGAGAGTGCAAGGATGTTAAGEST: gi|162172981|gb|FC347891.1|FC347891
genomic: TACAAGAATACAGATTTGACGTCTCAAAGCTGGAGCCTCTTGTAGCCAAGgtttgtcaac ... atggtgacagCCACATTCTCCAGACAACAGGGGTTTGGCTCGAGAGTGCAAGGATGTTAAG
EST: TACAAGAATACAGATTTGACGTCTCAAAGCTGGAGCCTCTTGTAGCCAAG CCACATTCTCCAGACAACAGGGGTTTGGCTCGAGAGTGCAAGGATGTTAAGEST: gi|162262854|gb|FC439273.1|FC439273
genomic: TACAAGAATACAGATTTGACGTCTCAAAGCTGGAGCCTCTTGTAGCCAAGgtttgtcaac ... atggtgacagCCACATTCTCCAGACAACAGGGGTTTGGCTCGAGAGTGCAAGGATGTTAAG
EST: TACAAGAATACAGATTTGACGTCTCAAAGCTGGAGCCTCTTGTAGCCAAG CCACATTCTCCAGACAACAGGGGTTTGGCTCGAGAGTGCAAGGATGTTAAGEST: gi|162237332|gb|FC412440.1|FC412440
genomic: TACAAGAATACAGATTTGACGTCTCAAAGCTGGAGCCTCTTGTAGCCAAGgtttgtcaac ... atggtgacagCCACATTCTCCAGACAACAGGGGTTTGGCTCGAGAGTGCAAGGATGTTAAG
EST: TACAAGAATACAGATTTGACGTCTCAAAGCTGGAGCCTCTTGTAGCCAAG CCACATTCTCCAGACAACAGGGGTTTGGCTCGAGAGTGCAAGGATGTTAAGEST: gi|162159195|gb|FC334366.1|FC334366
genomic: TACAAGAATACAGATTTGACGTCTCAAAGCTGGAGCCTCTTGTAGCCAAGgtttgtcaac ... atggtgacagCCACATTCTCCAGACAACAGGGGTTTGGCTCGAGAGTGCAAGGATGTTAAG
EST: TACAAGAATACAGATTTGACGTCTCAAAGCTGGAGCCTCTTGTAGCCAAG CCACATTCTCCAGACAACAGGGGTTTGGCTCGAGAGTGCAAGGATGTTAAGEST: gi|37847506|gb|BJ605514.1|BJ605514
genomic: TACAAGAATACAGATTTGACGTCTCAAAGCTGGAGCCTCTTGTAGCCAAGgtttgtcaac ... atggtgacagCCACATTCTCCAGACAACAGGGGTTTGGCTCGAGAGTGCAAGGATGTTAAG
EST: TACAAGGATACAGATTTGACGTCTCAAAGCTGGAGCCTCTTGTAGCCAAG CCACATTCTCCAGACAACAGGGGTTTGGCTCGAGAGTGCAAGGATGTTAAGEST: gi|162267272|gb|FC442060.1|FC442060
genomic: TACAAGAATACAGATTTGACGTCTCAAAGCTGGAGCCTCTTGTAGCCAAGgtttgtcaac ... atggtgacagCCACATTCTCCAGACAACAGGGGTTTGGCTCGAGAGTGCAAGGATGTTAAG
EST: TACAAGAATACAGATTTGACGTCTCAAAGCTGGAGCCTCTTGTAGCCAAG CCACATTCTCCAGACAACAGGGGTTTGGCTCGAGAGTGCAAGGATGTTAAGEST: gi|162222837|gb|FC399299.1|FC399299
genomic: TACAAGAATACAGATTTGACGTCTCAAAGCTGGAGCCTCTTGTAGCCAAGgtttgtcaac ... atggtgacagCCACATTCTCCAGACAACAGGGGTTTGGCTCGAGAGTGCAAGGATGTTAAG
EST: TACAAGAATACAGATTTGACGTCTCAAAGCTGGAGCCTCTTGTAGCCAAG CCACATTCTCCAGACAACAGGGGTTTGGCTCGAGAGTGCAAGGATGTTAAGEST: gi|162267271|gb|FC442059.1|FC442059
genomic: TACAAGAATACAGATTTGACGTCTCAAAGCTGGAGCCTCTTGTAGCCAAGgtttgtcaac ... atggtgacagCCACATTCTCCAGACAACAGGGGTTTGGCTCGAGAGTGCAAGGATGTTAAG
EST: TACAAGAATACAGATTTGACGTCTCAAAGCTGGAGCCTCTTGTAGCCAAG CCACATTCTCCAGACAACAGGGGTTTGGCTCGAGAGTGCAAGGATGTTAAGEST: gi|37841983|gb|BJ599991.1|BJ599991
genomic: TACAAGAATACAGATTTGACGTCTCAAAGCTGGAGCCTCTTGTAGCCAAGgtttgtcaac ... atggtgacagCCACATTCTCCAGACAACAGGGGTTTGGCTCGAGAGTGCAAGGATGTTAAG
EST: TACAAGAATACAGATTTGACGTCTCAAAGCTGGAGCCTCTTGTAGCCAAG CCACATTCTCCAGACAACAGGGGTTTGGCTCGAGAGTGCAAGGATGTTAAGEST: gi|37826305|gb|BJ584317.1|BJ584317
genomic: TACAAGAATACAGATTTGACGTCTCAAAGCTGGAGCCTCTTGTAGCCAAGgtttgtcaac ... atggtgacagCCACATTCTCCAGACAACAGGGGTTTGGCTCGAGAGTGCAAGGATGTTAAG
EST: TACAAGAATACAGATTTGACGTCTCAAAGCTGGAGCCTCTTGTAGCCAAG CCACATTCTCCAGACAACAGGGGTTTGGCTCGAGAGTGCAAGGATGTTAAGEST: gi|162190640|gb|FC367526.1|FC367526
genomic: TACAAGAATACAGATTTGACGTCTCAAAGCTGGAGCCTCTTGTAGCCAAGgtttgtcaac ... atggtgacagCCACATTCTCCAGACAACAGGGGTTTGGCTCGAGAGTGCAAGGATGTTAAG
EST: TACAAGAATACAGATTTGACGTCTCAAAGCTGGAGCCTCTTGTAGCCAAG CCACATTCTCCAGACAACAGGGGTTTGGCTCGAGAGTGCAAGGATGTTAAGEST: gi|208382289|gb|DC919277.1|DC919277
genomic: TACAAGAATACAGATTTGACGTCTCAAAGCTGGAGCCTCTTGTAGCCAAGgtttgtcaac ... atggtgacagCCACATTCTCCAGACAACAGGGGTTTGGCTCGAGAGTGCAAGGATGTTAAG
EST: TACAAGAATACAGATTTGACGTCTCAAAGCTGGAGCCTNTGGTAGCCAAG CCACATTCTCCAGACAACAGGGGTTTGGCTCGAGAGTGCAAGGATGTTAAGEST: gi|162258437|gb|FC434444.1|FC434444
genomic: TACAAGAATACAGATTTGACGTCTCAAAGCTGGAGCCTCTTGTAGCCAAGgtttgtcaac ... atggtgacagCCACATTCTCCAGACAACAGGGGTTTGGCTCGAGAGTGCAAGGATGTTAAG
EST: TACAAGAATACAGATTTGACGTCTCAAAGCTGGAGCCTCTTGTAGCCAAG CCACATTCTCCAGACAACAGGGGTTTGGCTCGAGAGTGCAAGGATGTTAAGEST: gi|67727259|gb|BJ977518.1|BJ977518
genomic: TACAAGAATACAGATTTGACGTCTCAAAGCTGGAGCCTCTTGTAGCCAAGgtttgtcaac ... atggtgacagCCACATTCTCCAGACAACAGGGGTTTGGCTCGAGAGTGCAAGGATGTTAAG
EST: TACAAGAATACAGATTTGACGTCTCAAAGCTGGAGCCTCTTGTAGCCAAG CCACATTCTCCAGACAACAGGGGTTTGGCTCGAGAGTGCAAGGATGTTAAGEST: gi|162275069|gb|FC450928.1|FC450928
genomic: TACAAGAATACAGATTTGACGTCTCAAAGCTGGAGCCTCTTGTAGCCAAGgtttgtcaac ... atggtgacagCCACATTCTCCAGACAACAGGGGTTTGGCTCGAGAGTGCAAGGATGTTAAG
EST: CGTCTCAAAGCTGGAGCCTCTTGTAGCCAAG CCACATTCTCCAGACAACAGGGGTTTGGCTCGAGAGTGCAAGGATGTTAAGEST: gi|162159194|gb|FC334365.1|FC334365
genomic: CGTCTCAAAGCTGGAGCCTCTTGTAGCCAAGgtttgtcaac ... atggtgacagCCACATTCTCCAGACAACAGGGGTTTGGCTCGAGAGTGCAAGGATGTTAAG
EST: TACAAGAATACAGATTTGACGTCTCAAAGCTGGAGCCTCTTGTAGCCAAG CCACATTCTCCAGACAACAGGGGTTTGGCTCGAGAGTGCAAGGATGTTAAGEST: gi|19778198|gb|BQ039280.1|BQ039280
genomic: TACAAGAATACAGATTTGACGTCTCAAAGCTGGAGCCTCTTGTAGCCAAGgtttgtcaac ... atggtgacagCCACATTCTCCAGACAACAGGGGTTTGGCTCGAGAGTGCAAGGATGTTAAG
EST: TACAAGAATACAGATTTGACGTCTCAAAGCTGGAGCCTCTTGTAGCCAAG CCACATTCTCCAGACAACAGGGGTTTGGCTCGAGAGTGCAAGGATGTTAAGEST: gi|162222838|gb|FC399300.1|FC399300
genomic: TACAAGAATACAGATTTGACGTCTCAAAGCTGGAGCCTCTTGTAGCCAAGgtttgtcaac ... atggtgacagCCACATTCTCCAGACAACAGGGGTTTGGCTCGAGAGTGCAAGGATGTTAAG
EST: TACAAGAATACAGATTTGACGTCTCANAGCTGGAGCCTCTTGTAGCCAAG CCACATTCTCCAGACAEST: gi|162158368|gb|FC334163.1|FC334163
genomic: TACAAGAATACAGATTTGACGTCTCAAAGCTGGAGCCTCTTGTAGCCAAGgtttgtcaac ... atggtgacagCCACATTCTCCAGACA
EST: TACAAGAATACAGATTTGACGTCTCAAAGCTGGAGCCTCTTGTAGCCAAG CCACATTCTCCAGACAACAGGGGTTTGGCTCGAGAGTGCAAGGATGTTAAGEST: gi|18335837|gb|BJ167858.1|BJ167858
genomic: TACAAGAATACAGATTTGACGTCTCAAAGCTGGAGCCTCTTGTAGCCAAGgtttgtcaac ... atggtgacagCCACATTCTCCAGACAACAGGGGTTTGGCTCGAGAGTGCAAGGATGTTAAG
EST: TACAAGAATACAGATTTGACGTCTCAAAGCTGGAGCCTCTTGTAGCCAAG CCACATTCTCCAGACAACAGGGGTTTGGCTCGAGAGTGCAAGGATGTTAAGEST: gi|19782687|gb|BQ039891.1|BQ039891
genomic: TACAAGAATACAGATTTGACGTCTCAAAGCTGGAGCCTCTTGTAGCCAAGgtttgtcaac ... atggtgacagCCACATTCTCCAGACAACAGGGGTTTGGCTCGAGAGTGCAAGGATGTTAAG
EST: TACAAGAATACAGATTTGACGTCTCAAAGCTGGAGCCTCTTGTAGCCAAG CCACATTCTCCAGACAACAGGGGTTTGGCTCGAGAGTGCAAGGATGTTAAGEST: gi|37853540|gb|BJ611548.1|BJ611548
genomic: TACAAGAATACAGATTTGACGTCTCAAAGCTGGAGCCTCTTGTAGCCAAGgtttgtcaac ... atggtgacagCCACATTCTCCAGACAACAGGGGTTTGGCTCGAGAGTGCAAGGATGTTAAG
EST: TACAAGAATACAGATTTGACGTCTCAAAGCTGGAGCCTCTTGTAGCCAAG CCACATTCTCCAGACAACAGGGGTTTGGCTCGAGAGTGCAAGGATGTTAAGEST: gi|162237331|gb|FC412439.1|FC412439
genomic: TACAAGAATACAGATTTGACGTCTCAAAGCTGGAGCCTCTTGTAGCCAAGgtttgtcaac ... atggtgacagCCACATTCTCCAGACAACAGGGGTTTGGCTCGAGAGTGCAAGGATGTTAAG
EST: TACAAGAATACAGATTTGACGTCTCAAAGCTGGAGCCTCTTGTAGCCAAG CCACATTCTCCAGACAACAGGGGTTTGGCTCGAGAGTGCAAGGATGTTAAGEST: gi|162199218|gb|FC375054.1|FC375054
genomic: TACAAGAATACAGATTTGACGTCTCAAAGCTGGAGCCTCTTGTAGCCAAGgtttgtcaac ... atggtgacagCCACATTCTCCAGACAACAGGGGTTTGGCTCGAGAGTGCAAGGATGTTAAG
EST: TACAAGAATACAGATTTGACGTCTCAAAGCTGGAGCCTCTTGTAGCCAAG CCACATTCTCCAGACAACAGGGGTTTGGCTCGAGAGTGCAAGGATGTTAAG
genomic: TACAAGAATACAGATTTGACGTCTCAAAGCTGGAGCCTCTTGTAGCCAAGgtttgtcaac ... atggtgacagCCACATTCTCCAGACAACAGGGGTTTGGCTCGAGAGTGCAAGGATGTTAAG
tgtgagagccaaccaattgtggtatctaatcatatgtgcgttgatatggtgacagCCACATTCTCCAGACAACAGGGGTTTGGCTCGAGAGTGCAAGGATGTTAAGATTGACCGCGTTTACATTGGGTCATGCACTGGTGGAAAGACTGAAGATT
taatcatat TA-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| gtttgtcaacattttgttattttctgttaataaattactttaatttttatctttaataaactgttgatcctcattcaattcgtatgtttggtgttgacgaatcttgttcaatacttattagtaagtgaaattgtgagagccaaccaattgtggtatctaatcatatgtgcgttgatatggtgacagCCACATTCTCCAGACAACAGGGGTTTGGCTCGAGAGTGCAAGGATGTTAAGATTGACCGCGTTTACATTGGGTCATGCACTGGTGGAAAGACTGAAGATT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGTGG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGTGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CTGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGAAGA