1 5' 3' | 2 5' 3' |
...cttggtgcgcattcatgttacggcagagaactttactaatctgcaattttttgaagtttggtataaacacgaatgttaaattgacttggctcgttttcagTACAAGCTTGTTACACTAGATTCAAGTCCACAAAAGCAGCCCCCACTTGAACAAAACACAAGTAGCAGCGACGTGAAGTTCTCGTTATCAACTAT
species | Physcomitrella patens |
transcript | PP1S98_70V6.2 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
EST: ACTAATTGTTTTTAAAGCCCTTTCGAGAGAATTGCGTTCGCTAGAGTCAG TACNAGCTTGGTACACTAGATTCCAAGTCCACAAAAGCA-CCCCCACTTGAEST: gi|100439730|gb|BY962079.1|BY962079
genomic: ACTAATTGTTTTTAAAGCCCTTTCGAGAGAATTGCGTTCGCTAGAGTCAGgtatggagtc ... tcgttttcagTACAAGCTTGTTACACTAGATTC-AAGTCCACAAAAGCAGCCCCCACTTGA
EST: ACTAATTGTTTTTAAAGCCCTTTCGAGAGAATTGCGTTCGCTAGAGTCAG TACAAGCTTGTTACACTAGATTCAAGTCCACAAAAGCAGCCCCCACTTGAA
genomic: ACTAATTGTTTTTAAAGCCCTTTCGAGAGAATTGCGTTCGCTAGAGTCAGgtatggagtc ... tcgttttcagTACAAGCTTGTTACACTAGATTCAAGTCCACAAAAGCAGCCCCCACTTGAA
attttttgaagtttggtataaacacgaatgttaaattgacttggctcgttttcagTACAAGCTTGTTACACTAGATTCAAGTCCACAAAAGCAGCCCCCACTTGAACAAAACACAAGTAGCAGCGACGTGAAGTTCTCGTTATCAACTAT
aattgac putative branch site (score: 1)
ctcgttttc putative PPT
aatgttaaatt TA-rich tract