1 5' 3' | 2 5' 3' | 3 5' 3' |
...ccacacgtatttcttggcatgtgcctccagggtagtttgttttgttgcccttgcgagttggatattttgttcgatctcctaaagcgtttctgttgtacagGAGAAGGAATTGATAAGCTTGAAGAGGGAGGCTAAGCTCAAGGGTGGATTCTATGTCGAGCCTGAGCCCAAGCTTATGTTCGTCGTCCGTATCCGTGG
species | Physcomitrella patens |
transcript | PP1S7_369V6.1 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
EST: CCCTCATTTTCAAGCGTGCTCAGCAGTACCAGGAGGAGTATCAGAGACAG GAGAAGGAATTGATAAGCTTGAAGAGGGAGGCTAAGCTCAAGGGTGGATTCEST: gi|162206138|gb|FC383131.1|FC383131
genomic: CCCTCATTTTCAAGCGTGCTCAGCAGTACCAGGAGGAGTATCAGAGACAGgtgaggcggt ... tgttgtacagGAGAAGGAATTGATAAGCTTGAAGAGGGAGGCTAAGCTCAAGGGTGGATTC
EST: CCCTCATTTTCAAGCGTGCTCAGCAGTACCAGGAGGAGTATCAGAGACAG GAGAAGGAATTGATAAGCTTGAAGAGGGAGGCTAAGCTCAAGGGTGGATTCEST: gi|67710007|gb|BJ965816.1|BJ965816
genomic: CCCTCATTTTCAAGCGTGCTCAGCAGTACCAGGAGGAGTATCAGAGACAGgtgaggcggt ... tgttgtacagGAGAAGGAATTGATAAGCTTGAAGAGGGAGGCTAAGCTCAAGGGTGGATTC
EST: CCCTCATTTTCAAGCGTGCTCAGCAGTACCAGGAGGAGTATCAGAGACAG GAGAAGGAATTGATAAGCTTGAAGAGGGAGGCTAAGCTCAAGGGTGGATTCEST: gi|162217475|gb|FC393151.1|FC393151
genomic: CCCTCATTTTCAAGCGTGCTCAGCAGTACCAGGAGGAGTATCAGAGACAGgtgaggcggt ... tgttgtacagGAGAAGGAATTGATAAGCTTGAAGAGGGAGGCTAAGCTCAAGGGTGGATTC
EST: CCCTCATTTTCAAGCGTGCTCAGCAGTACCAGGAGGAGTATCAGAGACAG GAGAAGGAATTGATAAGCTTGAAGAGGGAGGCTAAGCTCAAGGGTGGATTCEST: gi|7147639|gb|AW509561.1|AW509561
genomic: CCCTCATTTTCAAGCGTGCTCAGCAGTACCAGGAGGAGTATCAGAGACAGgtgaggcggt ... tgttgtacagGAGAAGGAATTGATAAGCTTGAAGAGGGAGGCTAAGCTCAAGGGTGGATTC
EST: CCCTCATTTTCAAGCGTGCTCAGCAGTACCAGGAGGAGTATCAGAGACAG GAGAAGGAATTGATAAGCTTGAAGAGGGAGGCTAAGCTCAAGGGTGGATTCEST: gi|162268134|gb|FC443812.1|FC443812
genomic: CCCTCATTTTCAAGCGTGCTCAGCAGTACCAGGAGGAGTATCAGAGACAGgtgaggcggt ... tgttgtacagGAGAAGGAATTGATAAGCTTGAAGAGGGAGGCTAAGCTCAAGGGTGGATTC
EST: CCCTCATTTTCAAGCGTGCTCAGCAGTACCAGGAGGAGTATCAGAGACAG GAGAAGGAATTGATAAGCTTGAAGAGGGAGGCTAAGCTCAAGGGTGGATTCEST: gi|162276099|gb|FC452375.1|FC452375
genomic: CCCTCATTTTCAAGCGTGCTCAGCAGTACCAGGAGGAGTATCAGAGACAGgtgaggcggt ... tgttgtacagGAGAAGGAATTGATAAGCTTGAAGAGGGAGGCTAAGCTCAAGGGTGGATTC
EST: CCCTCATTTTCAAGCGTGCTCAGCAGTACCAGGAGGAGTATCAGAGACAG GAGAAGGAATTGATAAGCTTGAAGAGGGAGGCTAAGCTCAAGGGTGGATTCEST: gi|18325454|gb|BJ157451.1|BJ157451
genomic: CCCTCATTTTCAAGCGTGCTCAGCAGTACCAGGAGGAGTATCAGAGACAGgtgaggcggt ... tgttgtacagGAGAAGGAATTGATAAGCTTGAAGAGGGAGGCTAAGCTCAAGGGTGGATTC
EST: CCCTCATTTTCAAGCGTGCTCAGCAGTACCAGGAGGAGTATCAGAGACAG GAGAAGGAATTGATAAGCTTGAAGAGGGAGGCTAAGCTCAAGGGTGGATTCEST: gi|19789428|gb|BQ041303.1|BQ041303
genomic: CCCTCATTTTCAAGCGTGCTCAGCAGTACCAGGAGGAGTATCAGAGACAGgtgaggcggt ... tgttgtacagGAGAAGGAATTGATAAGCTTGAAGAGGGAGGCTAAGCTCAAGGGTGGATTC
EST: CCCTCATTTTCAAGCGTGCTCANNNNNNNCAGGAGGAGTATCAGAGACAG GAGAAGGAATTGATAAGCTTGAAGAGGGAGGCTAAGCTCAAGGGTGGATTCEST: gi|67716289|gb|BJ966549.1|BJ966549
genomic: CCCTCATTTTCAAGCGTGCTCAGCAGTACCAGGAGGAGTATCAGAGACAGgtgaggcggt ... tgttgtacagGAGAAGGAATTGATAAGCTTGAAGAGGGAGGCTAAGCTCAAGGGTGGATTC
EST: CCCTCATTTTCAAGCGTGCTCAGCAGTACCAGGAGGAGTATCAGAGACAG GAGAAGGAATTGATAAGCTTGAAGAGGGAGGCTAAGCTCAAGGGTGGATTCEST: gi|162192487|gb|FC368623.1|FC368623
genomic: CCCTCATTTTCAAGCGTGCTCAGCAGTACCAGGAGGAGTATCAGAGACAGgtgaggcggt ... tgttgtacagGAGAAGGAATTGATAAGCTTGAAGAGGGAGGCTAAGCTCAAGGGTGGATTC
EST: CCCTCATTTTCAAGCGTGCTCAGCAGTACCAGGAGGAGTATCAGAGACAG GAGAAGGAATTGATAAGCTTGAAGAGGGAGGCTAAGCTCAAGGGTGGATTCEST: gi|162261536|gb|FC437553.1|FC437553
genomic: CCCTCATTTTCAAGCGTGCTCAGCAGTACCAGGAGGAGTATCAGAGACAGgtgaggcggt ... tgttgtacagGAGAAGGAATTGATAAGCTTGAAGAGGGAGGCTAAGCTCAAGGGTGGATTC
EST: CCCTCATTTTCAAGCGTGCTCAGCAGTACCAGGAGGAGTATCAGAGACAG GAGAAGGAATTGATAAGCTTGAAGAGGGAGGCTAAGCTCAAGGGTGGATTCEST: gi|67702006|gb|BJ962239.1|BJ962239
genomic: CCCTCATTTTCAAGCGTGCTCAGCAGTACCAGGAGGAGTATCAGAGACAGgtgaggcggt ... tgttgtacagGAGAAGGAATTGATAAGCTTGAAGAGGGAGGCTAAGCTCAAGGGTGGATTC
EST: CCCTCATTTTCAAGCGTGCTCAGCAGTACCAGGAGGAGTATCAGAGACAG GAGAAGGAATTGATAAGCTTGAAGAGGGAGGCTAAGCTCAAGGGTGGATTCEST: gi|162230958|gb|FC407213.1|FC407213
genomic: CCCTCATTTTCAAGCGTGCTCAGCAGTACCAGGAGGAGTATCAGAGACAGgtgaggcggt ... tgttgtacagGAGAAGGAATTGATAAGCTTGAAGAGGGAGGCTAAGCTCAAGGGTGGATTC
EST: CCCTCATTTTCAAGCGTGCTCAGCAGTACCAGGAGGAGTATCAGAGACAG GAGAAGGAATTGATAAGCTTGAAGAGGGAGGCTAAGCTCAAGGGTGGATTCEST: gi|162219897|gb|FC396712.1|FC396712
genomic: CCCTCATTTTCAAGCGTGCTCAGCAGTACCAGGAGGAGTATCAGAGACAGgtgaggcggt ... tgttgtacagGAGAAGGAATTGATAAGCTTGAAGAGGGAGGCTAAGCTCAAGGGTGGATTC
EST: CCCTCATTTTCAAGCGTGCTCAGCAGTACCAGGAGGAGTATCAGAGACAG GAGAAGGAATTGATAAGCTTGAAGAGGGAGGCTAAGCTCAAGGGTGGATTCEST: gi|18343052|gb|BJ175089.1|BJ175089
genomic: CCCTCATTTTCAAGCGTGCTCAGCAGTACCAGGAGGAGTATCAGAGACAGgtgaggcggt ... tgttgtacagGAGAAGGAATTGATAAGCTTGAAGAGGGAGGCTAAGCTCAAGGGTGGATTC
EST: CCCTCATTTTCAAGCGTGCTCAGCAGTACCAGGAGGAGTATCAGAGACAG GAGAAGGAATTGATAAGCTTGAAGAGGGAGGCTAAGCTCAAGGGTGGATTCEST: gi|67704061|gb|BJ964294.1|BJ964294
genomic: CCCTCATTTTCAAGCGTGCTCAGCAGTACCAGGAGGAGTATCAGAGACAGgtgaggcggt ... tgttgtacagGAGAAGGAATTGATAAGCTTGAAGAGGGAGGCTAAGCTCAAGGGTGGATTC
EST: CCCTCATTTTCAAGCGTGCTCAGCAGTACCAGGAGGAGTATCAGAGACAA GAGAAGGAATTGATAAGCTTGAAGAGGGAGGCTAAGCTCAAGGGTGGATTCEST: gi|18335238|gb|BJ167256.1|BJ167256
genomic: CCCTCATTTTCAAGCGTGCTCAGCAGTACCAGGAGGAGTATCAGAGACAGgtgaggcggt ... tgttgtacagGAGAAGGAATTGATAAGCTTGAAGAGGGAGGCTAAGCTCAAGGGTGGATTC
EST: CCCTCATTTTCAAGCGTGCTCAGCAGTACCAGGAGGAGTATCAGAGACAG GAGAAGGAATTGATAAGCTTGAAGAGGGAGGCTAAGCTCAAGGGTGGATTCEST: gi|162268133|gb|FC443811.1|FC443811
genomic: CCCTCATTTTCAAGCGTGCTCAGCAGTACCAGGAGGAGTATCAGAGACAGgtgaggcggt ... tgttgtacagGAGAAGGAATTGATAAGCTTGAAGAGGGAGGCTAAGCTCAAGGGTGGATTC
EST: CCCTCATTTTCAAGCGTGCTCAGCAGTACCAGGAGGAGTATCAGAGACAG GAGAAGGAATTGATAAGCTTGAAGAGGGAGGCTAAGCTCAAGGGTGGATTNEST: gi|67570505|gb|BJ943329.1|BJ943329
genomic: CCCTCATTTTCAAGCGTGCTCAGCAGTACCAGGAGGAGTATCAGAGACAGgtgaggcggt ... tgttgtacagGAGAAGGAATTGATAAGCTTGAAGAGGGAGGCTAAGCTCAAGGGTGGATTC
EST: CCCTCATTTTCAAGCGTGCTCAGCAGTACCAGGAGGAGTATCAGAGACAG GAGAAGGAATTGATAAGCTTGAAGAGGGAGGCTAAGCTCAAGGGTGGATTCEST: gi|67724079|gb|BJ974338.1|BJ974338
genomic: CCCTCATTTTCAAGCGTGCTCAGCAGTACCAGGAGGAGTATCAGAGACAGgtgaggcggt ... tgttgtacagGAGAAGGAATTGATAAGCTTGAAGAGGGAGGCTAAGCTCAAGGGTGGATTC
EST: CCCTCATTTTCAAGCGTGCTCAGCAGTACCAGGAGGAGTATCAGAGACAG GAGAAGGAATTGATAAGCTTGAAGAGGGAGGCTAAGCTCAAGGGTGGATTCEST: gi|162266141|gb|FC441890.1|FC441890
genomic: CCCTCATTTTCAAGCGTGCTCAGCAGTACCAGGAGGAGTATCAGAGACAGgtgaggcggt ... tgttgtacagGAGAAGGAATTGATAAGCTTGAAGAGGGAGGCTAAGCTCAAGGGTGGATTC
EST: CCCTCATTTTCAAGCGTGCTCAGCAGTACCAGGAGGAGTATCAGAGACAG GAGAAGGAATTGATAAGCTTGAAGAGGGAGGCTAAGCTCAAGGGTGGATTCEST: gi|162206137|gb|FC383130.1|FC383130
genomic: CCCTCATTTTCAAGCGTGCTCAGCAGTACCAGGAGGAGTATCAGAGACAGgtgaggcggt ... tgttgtacagGAGAAGGAATTGATAAGCTTGAAGAGGGAGGCTAAGCTCAAGGGTGGATTC
EST: CCCTCATTTTCAAGCGTGCTCAGCAGTACCAGGAGGAGTATCAGAGACAG GAGAAGGAATTGATAAGCTTGAAGAGGGAGGCTAAGCTCAAGGGTGGATTCEST: gi|67692997|gb|BJ953230.1|BJ953230
genomic: CCCTCATTTTCAAGCGTGCTCAGCAGTACCAGGAGGAGTATCAGAGACAGgtgaggcggt ... tgttgtacagGAGAAGGAATTGATAAGCTTGAAGAGGGAGGCTAAGCTCAAGGGTGGATTC
EST: CCCTCATTTTCAAGCGTGCTCAGCAGTACCAGGAGGAGTATCAGAGACAG GAGAAGGAATTGATAAGCTTGAAGAGGGAGGCTAAGCTCAAGGGTGGATTCEST: gi|162217474|gb|FC393150.1|FC393150
genomic: CCCTCATTTTCAAGCGTGCTCAGCAGTACCAGGAGGAGTATCAGAGACAGgtgaggcggt ... tgttgtacagGAGAAGGAATTGATAAGCTTGAAGAGGGAGGCTAAGCTCAAGGGTGGATTC
EST: CCCTCATTTTCAAGCGTGCTCAGCAGTACCAGGAGGAGTATCAGAGACAG GAGAAGGAATTGATAAGCTTGAAGAGGGAGGCTAAGCTCAAGGGTGGATTCEST: gi|18327318|gb|BJ159320.1|BJ159320
genomic: CCCTCATTTTCAAGCGTGCTCAGCAGTACCAGGAGGAGTATCAGAGACAGgtgaggcggt ... tgttgtacagGAGAAGGAATTGATAAGCTTGAAGAGGGAGGCTAAGCTCAAGGGTGGATTC
EST: CCCTCATTTTCAAGCGTGCTCAGCAGTACCAGGAGGAGTATCAGAGACAG GAGAAGGAATTGATAAGCTTGAAGAGGGAGGCTAAGCTCAAGGGTGGATTCEST: gi|162254771|gb|FC431060.1|FC431060
genomic: CCCTCATTTTCAAGCGTGCTCAGCAGTACCAGGAGGAGTATCAGAGACAGgtgaggcggt ... tgttgtacagGAGAAGGAATTGATAAGCTTGAAGAGGGAGGCTAAGCTCAAGGGTGGATTC
EST: CCCTCATTTTCAAGCGTGCTCAGCAGTACCAGGAGGAGTATCAGAGACAG GAGAAGGAATTGATAAGCTTGAAGAGGGAGGCTAAGCTCAAGGGTGGATTCEST: gi|162266140|gb|FC441889.1|FC441889
genomic: CCCTCATTTTCAAGCGTGCTCAGCAGTACCAGGAGGAGTATCAGAGACAGgtgaggcggt ... tgttgtacagGAGAAGGAATTGATAAGCTTGAAGAGGGAGGCTAAGCTCAAGGGTGGATTC
EST: CCCTCATTTTCAAGCGTGCTCAGCAGTACCAGGAGGAGTATCAGAGACAG GAGAAGGAATTGATAAGCTTGAAGAGGGAGGCTAAGCTCAAGGGTGGATTCEST: gi|67703365|gb|BJ963598.1|BJ963598
genomic: CCCTCATTTTCAAGCGTGCTCAGCAGTACCAGGAGGAGTATCAGAGACAGgtgaggcggt ... tgttgtacagGAGAAGGAATTGATAAGCTTGAAGAGGGAGGCTAAGCTCAAGGGTGGATTC
EST: CCCTCATTTTCAAGCGTGCTCAGCAGTACCAGGAGGAGTATCAGAGACAG GAGAAGGAATTGATAAGCTTGAAGAGGGAGGCTAAGCTCAAGGGTGGATTCEST: gi|18337941|gb|BJ169965.1|BJ169965
genomic: CCCTCATTTTCAAGCGTGCTCAGCAGTACCAGGAGGAGTATCAGAGACAGgtgaggcggt ... tgttgtacagGAGAAGGAATTGATAAGCTTGAAGAGGGAGGCTAAGCTCAAGGGTGGATTC
EST: CCCTCATTTTCAAGCGTGCTCAGCAGTACCAGGAGGAGTATCAGAGACAG GAGAAGGAATTGATAAGCTTGAAGAGGGAGGCTAAGCTCAAGGGTGGATTCEST: gi|67569731|gb|BJ942555.1|BJ942555
genomic: CCCTCATTTTCAAGCGTGCTCAGCAGTACCAGGAGGAGTATCAGAGACAGgtgaggcggt ... tgttgtacagGAGAAGGAATTGATAAGCTTGAAGAGGGAGGCTAAGCTCAAGGGTGGATTC
EST: CCCTCATTTTCAAGCGTGCTCAGCAGTACCAGGAGGAGTATCAGAGACAG GAGAAGGAATTGATAAGCTTGAAGAGGGAGGCTAAGCTCAAGGGTGGATTCEST: gi|162230957|gb|FC407212.1|FC407212
genomic: CCCTCATTTTCAAGCGTGCTCAGCAGTACCAGGAGGAGTATCAGAGACAGgtgaggcggt ... tgttgtacagGAGAAGGAATTGATAAGCTTGAAGAGGGAGGCTAAGCTCAAGGGTGGATTC
EST: GAGTATCAGAGACAG GAGAAGGAATTGATAAGCTTGAAGAGGGAGGCTAAGCTCAAGGGTGGATTCEST: gi|15727544|gb|BI740344.1|BI740344
genomic: GAGTATCAGAGACAGgtgaggcggt ... tgttgtacagGAGAAGGAATTGATAAGCTTGAAGAGGGAGGCTAAGCTCAAGGGTGGATTC
EST: CCCTCATTTTCAAGCGTGCTCAGCAGTACCAGGAGGAGTATCAGAGACAG GAGAAGGAATTGATAAGCTTGAAGAGGGAGGCTAAGCTCAAGGGTGGATTCEST: gi|67703254|gb|BJ963487.1|BJ963487
genomic: CCCTCATTTTCAAGCGTGCTCAGCAGTACCAGGAGGAGTATCAGAGACAGgtgaggcggt ... tgttgtacagGAGAAGGAATTGATAAGCTTGAAGAGGGAGGCTAAGCTCAAGGGTGGATTC
EST: CCCTCATTTTCAAGCGTGCTCAGCAGTACCAGGAGGAGTATCAGAGACAG GAGAAGGAATTGATAAGCTTGAGGAGGGAGGCTAAGCTCAAGGGTGGATTCEST: gi|7207256|gb|AW561259.1|AW561259
genomic: CCCTCATTTTCAAGCGTGCTCAGCAGTACCAGGAGGAGTATCAGAGACAGgtgaggcggt ... tgttgtacagGAGAAGGAATTGATAAGCTTGAAGAGGGAGGCTAAGCTCAAGGGTGGATTC
EST: CCCTCATTTTCAAGCGTGCTCAGCAGTACCAGGAGGAGTATCAGAGACAG GAGAAGGAATTGATAAGCTTGAAGAGGGAGGCTAAGCTCAAGGGTGGATTCEST: gi|67693788|gb|BJ954021.1|BJ954021
genomic: CCCTCATTTTCAAGCGTGCTCAGCAGTACCAGGAGGAGTATCAGAGACAGgtgaggcggt ... tgttgtacagGAGAAGGAATTGATAAGCTTGAAGAGGGAGGCTAAGCTCAAGGGTGGATTC
EST: CCCTCATTTTCAAGCGTGCTCAGCAGTACCAGGAGGAGTATCAGAGACAG GAGAAGGAATTGATAAGCTTGAAGAGGGAGGCTAAGCTCAAGGGTGGATTCEST: gi|67720498|gb|BJ970757.1|BJ970757
genomic: CCCTCATTTTCAAGCGTGCTCAGCAGTACCAGGAGGAGTATCAGAGACAGgtgaggcggt ... tgttgtacagGAGAAGGAATTGATAAGCTTGAAGAGGGAGGCTAAGCTCAAGGGTGGATTC
EST: CCCTCATTTTCAAGCGTGCTCAGCAGTACCAGGAGGAGTATCAGAGACAG GAGAAGGAATTGATAAGCTTGAAGAGGGAGGCTAAGCTCAAGGGTGGATTCEST: gi|18372920|gb|BJ204522.1|BJ204522
genomic: CCCTCATTTTCAAGCGTGCTCAGCAGTACCAGGAGGAGTATCAGAGACAGgtgaggcggt ... tgttgtacagGAGAAGGAATTGATAAGCTTGAAGAGGGAGGCTAAGCTCAAGGGTGGATTC
EST: CCCTCATTTTCAAGCGTGCTCAGCAGTACCAGGAGGAGTATCAGAGACAG GAGAAGGAATTGATAAGCTTGAAGAGGGAGGCTAAGCTCAAGGGTGGATTCEST: gi|67702376|gb|BJ962609.1|BJ962609
genomic: CCCTCATTTTCAAGCGTGCTCAGCAGTACCAGGAGGAGTATCAGAGACAGgtgaggcggt ... tgttgtacagGAGAAGGAATTGATAAGCTTGAAGAGGGAGGCTAAGCTCAAGGGTGGATTC
EST: CCCTCATTTTCAAGCGTGCTCAGCAGTACCAGGAGGAGTATCAGAGACAG GAGAAGGAATTGATAAGCTTGAAGAGGGAGGCTAAGCTCAAGGGTGGATTCEST: gi|18330136|gb|BJ162142.1|BJ162142
genomic: CCCTCATTTTCAAGCGTGCTCAGCAGTACCAGGAGGAGTATCAGAGACAGgtgaggcggt ... tgttgtacagGAGAAGGAATTGATAAGCTTGAAGAGGGAGGCTAAGCTCAAGGGTGGATTC
EST: CCCTCATTTTCAAGCGTGCTCAGCAGTACCAGGAGGAGTATCAGAGACAG GAGAAGGAATTGATAAGCTTGAAGAGGGAGGCTAAGCTCAAGGGTGGATTCEST: gi|162261535|gb|FC437552.1|FC437552
genomic: CCCTCATTTTCAAGCGTGCTCAGCAGTACCAGGAGGAGTATCAGAGACAGgtgaggcggt ... tgttgtacagGAGAAGGAATTGATAAGCTTGAAGAGGGAGGCTAAGCTCAAGGGTGGATTC
EST: CAGCAGTACCAGGAGGAGTATCAGAGACAG GAGAAGGAATTGATAAGCTTGAAGAGGGAGGCTAAGCTCAAGGGTGGATTCEST: gi|162202964|gb|FC380349.1|FC380349
genomic: CAGCAGTACCAGGAGGAGTATCAGAGACAGgtgaggcggt ... tgttgtacagGAGAAGGAATTGATAAGCTTGAAGAGGGAGGCTAAGCTCAAGGGTGGATTC
EST: CCCTCATTTTCAAGCGTGCTCAGCAGTACCAGGAGGAGTATCAGAGACAG GAGAAGGAATTGATAAGCTTGAAGAGGGAGGCTAAGCTCAAGGGTGGATTCEST: gi|67704221|gb|BJ964454.1|BJ964454
genomic: CCCTCATTTTCAAGCGTGCTCAGCAGTACCAGGAGGAGTATCAGAGACAGgtgaggcggt ... tgttgtacagGAGAAGGAATTGATAAGCTTGAAGAGGGAGGCTAAGCTCAAGGGTGGATTC
EST: CCCTCATTTTCAAGCGTGCTCAGCAGTACCAGGAGGAGTATCAGAGACAG GAGAAGGAATTGATAAGCTTGAAGAGGGAGGCTAAGCTCAAGGGTGGATTCEST: gi|37843436|gb|BJ601444.1|BJ601444
genomic: CCCTCATTTTCAAGCGTGCTCAGCAGTACCAGGAGGAGTATCAGAGACAGgtgaggcggt ... tgttgtacagGAGAAGGAATTGATAAGCTTGAAGAGGGAGGCTAAGCTCAAGGGTGGATTC
EST: CAAGCGTGCTCAGCAGTACCAGGAGGAGTATCAGAGACAG GAGAAGGAATTGATAAGCTTGAAGAGGGAGGCTAAGCTCAAGGGTGGATTCEST: gi|19787357|gb|BQ040606.1|BQ040606
genomic: CAAGCGTGCTCAGCAGTACCAGGAGGAGTATCAGAGACAGgtgaggcggt ... tgttgtacagGAGAAGGAATTGATAAGCTTGAAGAGGGAGGCTAAGCTCAAGGGTGGATTC
EST: CCCTCATTTTCAAGCGTGCTCAGCAGTACCAGGAGGAGTATCAGAGACAG GAGAAGGAATTGATAAGCTTGAAGAGGGAGGCTAAGCTCAAGGGTGGATTCEST: gi|37822200|gb|BJ580266.1|BJ580266
genomic: CCCTCATTTTCAAGCGTGCTCAGCAGTACCAGGAGGAGTATCAGAGACAGgtgaggcggt ... tgttgtacagGAGAAGGAATTGATAAGCTTGAAGAGGGAGGCTAAGCTCAAGGGTGGATTC
EST: ATTTTCAAGCGTGCTCAGCAGTACCAGGAGGAGTATCAGAGACAG GAGAAGGAATTGATAAGCTTGAAGAGGGAGGCTAAGCTCAAGGGTGGATTC
genomic: ATTTTCAAGCGTGCTCAGCAGTACCAGGAGGAGTATCAGAGACAGgtgaggcggt ... tgttgtacagGAGAAGGAATTGATAAGCTTGAAGAGGGAGGCTAAGCTCAAGGGTGGATTC
tgcccttgcgagttggatattttgttcgatctcctaaagcgtttctgttgtacagGAGAAGGAATTGATAAGCTTGAAGAGGGAGGCTAAGCTCAAGGGTGGATTCTATGTCGAGCCTGAGCCCAAGCTTATGTTCGTCGTCCGTATCCGTGG
tcctaaa putative branch site (score: 78)
tttctgtt putative PPT
atattttgtt TA-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ccacacgtatttcttggcatgtgcctccagggtagtttgttttgttgcccttgcgagttggatattttgttcgatctcctaaagcgtttctgttgtacagGAGAAGGAATTGATAAGCTTGAAGAGGGAGGCTAAGCTCAAGGGTGGATTCTATGTCGAGCCTGAGCCCAAGCTTATGTTCGTCGTCCGTATCCGTGG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAAGCT