1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
...taattaaatatttttatgggtttatgagaagaatggcggttcacagaattattttgtcgaaaacatactaagtgtgttttgtcggtggttctaatttcagCAATCTTCCGTTCTGCTGGCACCACCTCAAAGG
species | Physcomitrella patens |
transcript | PP1S79_71V6.1 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
EST: TGGGAAGGATGGATTCGTCGCTCGACACTCACAACATCGAACTCCAAAAG CAATCTTCCGTTCTGCTGGCACCACCTCAAAGGEST: gi|18373471|gb|BJ205049.1|BJ205049
genomic: TGGGAAGGATGGATTCGTCGCTCGACACTCACAACATCGAACTCCAAAAGgtgggcgcta ... ctaatttcagCAATCTTCCGTTCTGCTGGCACCACCTCAAAGG
EST: TGGGAAGGATGGATTCGTCGCTCGACACTCACAACATCGAACTCCAAAAG CAATCTTCCGTTCTGCTGGCACCACCTCAAAGGEST: gi|67716628|gb|BJ966888.1|BJ966888
genomic: TGGGAAGGATGGATTCGTCGCTCGACACTCACAACATCGAACTCCAAAAGgtgggcgcta ... ctaatttcagCAATCTTCCGTTCTGCTGGCACCACCTCAAAGG
EST: TGGGAAGGATGGATTCGTCGCTCGACACTCACAACATCGAACTCCAAAAG CAATCTTCCGTTCTGCTGGCACCACCTCAAAGG
genomic: TGGGAAGGATGGATTCGTCGCTCGACACTCACAACATCGAACTCCAAAAGgtgggcgcta ... ctaatttcagCAATCTTCCGTTCTGCTGGCACCACCTCAAAGG
gaattattttgtcgaaaacatactaagtgtgttttgtcggtggttctaatttcagCAATCTTCCGTTCTGCTGGCACCACCTCAAAGG
ttctaat putative branch site (score: 6)
ttctaattt TA-rich tract