Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|18326144|gb|BJ158143.1|BJ158143EST: GGTCGTCATATTCAATTCGGGAATCAAGTCAGTGAAGACGGTGGCAACAA ATCACGTCGGACTTGGAAACCCAATGTGCAAACGAAACGGATTTTTAGTTT
genomic: GGTCGTCATATTCAATTCGGGAATCAAGTCAGTGAAGACGGTGGCAACAAgtgagtcttt ... ttggcttcagATCACGTCGGACTTGGAAACCCAATGTGCAAACGAAACGGATTTTTAGTTT
EST:
gi|162260463|gb|FC436103.1|FC436103EST: GGTCGTCATATTCAATTCGGGAATCAAGTCAGTGAAGACGGTGGCAACAA ATCACGTCGGACTTGGAAACCCAATGTGCAAACGAAACGGATTTTTAGTTT
genomic: GGTCGTCATATTCAATTCGGGAATCAAGTCAGTGAAGACGGTGGCAACAAgtgagtcttt ... ttggcttcagATCACGTCGGACTTGGAAACCCAATGTGCAAACGAAACGGATTTTTAGTTT
EST:
gi|37822687|gb|BJ580753.1|BJ580753EST: GGTCGTCATATTCAATTCGGGAATCAAGTCAGTGAAGACGGTGGCAACAA ATCACGTCGGACTTGGAAACCCAATGTGCAAACGAAACGGATTTTTAGTTT
genomic: GGTCGTCATATTCAATTCGGGAATCAAGTCAGTGAAGACGGTGGCAACAAgtgagtcttt ... ttggcttcagATCACGTCGGACTTGGAAACCCAATGTGCAAACGAAACGGATTTTTAGTTT
EST:
gi|162260462|gb|FC436102.1|FC436102EST: GGTCGTCATATTCAATTCGGGAATCAAGTCAGTGAAGACGGTGGCAACAA ATCACGTCGGACTTGGAAACCCAATGTGCAAACGAAACGGATTTTTAGTTT
genomic: GGTCGTCATATTCAATTCGGGAATCAAGTCAGTGAAGACGGTGGCAACAAgtgagtcttt ... ttggcttcagATCACGTCGGACTTGGAAACCCAATGTGCAAACGAAACGGATTTTTAGTTT
EST:
gi|18371398|gb|BJ203000.1|BJ203000EST: GGTCGTCATATTCAATTCGGGAATCAAGTCAGTGAAGACGGTGGCAACAA ATCACGTCGGACTTGGAAACCCAATGTGCAAACGAAACGGATTTTTAGTTT
genomic: GGTCGTCATATTCAATTCGGGAATCAAGTCAGTGAAGACGGTGGCAACAAgtgagtcttt ... ttggcttcagATCACGTCGGACTTGGAAACCCAATGTGCAAACGAAACGGATTTTTAGTTT
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
gtgagtctttgtcgtcttgggggtgttgaagctgttttcttttttcagttcgttcgtgattgttgtaagcagtattccagtttgtgtatggaatggttttcgatgcagaatcattgttggattttggtgcttggagatgttttcagtggtgggtactttgtggactttggttttggcttcagATCACGTCGGACTTGGAAACCCAATGTGCAAACGAAACGGATTTTTAGTTTGGGGTTGGATCGGTACATCAAGATGAATATTACCATGCACGCCCTGCGG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGATG