1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
...ttccagttgagttcttctaggttttccctttccatcttcacttctcttagtgcctgctctctcaagaattaatttaacgccttactgtgcgcatccacagACCACAATATTCTCACTTCACCAGAGGCGGCCTTTGCCATGTGCAAAGTGGACAGGAGGCTATTTGTCCCTGATGCCAGATTGGCTTACAATGATGCTCC
species | Physcomitrella patens |
transcript | PP1S70_173V6.1 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
EST: GTGGCGTTGTCATGGGGCTACGAACGCCGAGCTGATCTCCAACTTGCAGA ACCACAATATTCTCACTTCACCAGAGGCGGCCTTTGCCATGTGCAAAGTGGEST: gi|208376357|gb|DC932267.1|DC932267
genomic: GTGGCGTTGTCATGGGGCTACGAACGCCGAGCTGATCTCCAACTTGCAGAgtacgcgcac ... gcatccacagACCACAATATTCTCACTTCACCAGAGGCGGCCTTTGCCATGTGCAAAGTGG
EST: GTGGCGTTGTCATGGGGCTACGAACGCCGAGCTGATCTCCAACTTGCAGA ACCACAATATTCTCACTTCACCAGAGGCGGCCTTTGCCATGTGCAAAGTGGEST: gi|67718150|gb|BJ968409.1|BJ968409
genomic: GTGGCGTTGTCATGGGGCTACGAACGCCGAGCTGATCTCCAACTTGCAGAgtacgcgcac ... gcatccacagACCACAATATTCTCACTTCACCAGAGGCGGCCTTTGCCATGTGCAAAGTGG
EST: GTGGCGTTGTCATGGGGCTACGAACGCCGAGCTGATCTCCAACTTGCAGA ACCACAATATTCTCACTTCACCAGAGGCGGCCTTTGCCATGTGCAAAGTGG
genomic: GTGGCGTTGTCATGGGGCTACGAACGCCGAGCTGATCTCCAACTTGCAGAgtacgcgcac ... gcatccacagACCACAATATTCTCACTTCACCAGAGGCGGCCTTTGCCATGTGCAAAGTGG
cttagtgcctgctctctcaagaattaatttaacgccttactgtgcgcatccacagACCACAATATTCTCACTTCACCAGAGGCGGCCTTTGCCATGTGCAAAGTGGACAGGAGGCTATTTGTCCCTGATGCCAGATTGGCTTACAATGATGCTCC
gccttac putative branch site (score: 14)
tcaagaattaatttaa TA-rich tract