Sequence
atgc intronic sequence ATGC exonic sequence...gttgtcaagaagcgttcgttaaccgggtttcttcacgtaaaggcgtcaaaaggatcaagccactggccaaatcacgatcatgttgttgaatattatgcagCATTTCCAGCACCGGATTCCGTCGACTGCTTGTGCTTCCGCTCAAGAAGCTCGAGTTTGTGAGGTGTTTGGAAAAGTTAGACCAAATGTCGGCTCGTTTA
Basic information
species | Physcomitrella patens |
transcript | PP1S6_287V6.3 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|100361213|gb|BY946970.1|BY946970EST: ATCCGCTTACAATGTCGGGTGAGACTTCAGGGTGAGCAAGTTTCATGCAG CATTTCCAGCACCGGATTCCGTCGACTGCTTGTGCTTCCGCTCAAGAAGCT
genomic: ATCCGCTTACAATGTCGGGTGAGACTTCAGGGTGAGCAAGTTTCATGCAGgtgtgttgtc ... tattatgcagCATTTCCAGCACCGGATTCCGTCGACTGCTTGTGCTTCCGCTCAAGAAGCT
atgc intronic sequence ATGC exonic sequenceIntronic sequence truncated to 55 bases.tcaaaaggatcaagccactggccaaatcacgatcatgttgttgaatattatgcagCATTTCCAGCACCGGATTCCGTCGACTGCTTGTGCTTCCGCTCAAGAAGCTCGAGTTTGTGAGGTGTTTGGAAAAGTTAGACCAAATGTCGGCTCGTTTA
ttgttgaatattat TA-rich tract