1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
...gtgtgagggctcgcggactggtgtattttagtggatctttgcttacctctacttcaacccacgattttctaatctcgagcatcggcgttgcttcttgcagTGGTCACGGCAGCTTCTCCAACAACAAGACACTCAACAGCCTCATTGGACACTTGACTCACTCGTCCATACTCGTTCCTTACCACGGATG
species | Physcomitrella patens |
transcript | PP1S69_223V6.1 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
EST: CTAGCGCAGGGGACTATGTTTTGGGCCCTATTCGTCCTGGGTCATGACTG TGGTCACGGCAGCTTCTC-AACAACAA-ACACTCA-CAGCCTCAT-GGNA-EST: gi|67574337|gb|BJ947161.1|BJ947161
genomic: CTAGCGCAGGGGACTATGTTTTGGGCCCTATTCGTCCTGGGTCATGACTGgtaggtctct ... cttcttgcagTGGTCACGGCAGCTTCTCCAACAACAAGACACTCAACAGCCTCATTGG-AC
EST: CTAGCGCAGGGGACTATGTTTTGGGCCCTATTCGTCCTGGGTCATGACTG TGGTCACGGCAGCTTCTCCAACAACAAGACACTCAACAGCCTCATTGGACA
genomic: CTAGCGCAGGGGACTATGTTTTGGGCCCTATTCGTCCTGGGTCATGACTGgtaggtctct ... cttcttgcagTGGTCACGGCAGCTTCTCCAACAACAAGACACTCAACAGCCTCATTGGACA
cctctacttcaacccacgattttctaatctcgagcatcggcgttgcttcttgcagTGGTCACGGCAGCTTCTCCAACAACAAGACACTCAACAGCCTCATTGGACACTTGACTCACTCGTCCATACTCGTTCCTTACCACGGATG
ttctaat putative branch site (score: 7)
ttgcttctt putative PPT
attttctaat TA-rich tract