1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' | 17 5' 3' |
...cgggccctgcgtagattcaatgctgtttagctagtgtgttttctgacgccgttgttttgtgttggttggtttgggctctacttcgtgtgtaatgcatcagTCCCAACATG
species | Physcomitrella patens |
transcript | PP1S68_234V6.1 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
EST: TTCCAACCATTCTGGCGTTTCGCCGTCAATTTCTTTCCCATGTGGATGCC TCCCAACATGEST: gi|100391368|gb|BY971622.1|BY971622
genomic: TTCCAACCATTCTGGCGTTTCGCCGTCAATTTCTTTCCCATGTGGATGCCgtaagtggac ... aatgcatcagTCCCAACATG
EST: TTCCAACCATTCTGGCGTTTCGCCGTCAATTTCTTTCCCATGTGGATGCC TCCCAACATGEST: gi|208353776|gb|DC906464.1|DC906464
genomic: TTCCAACCATTCTGGCGTTTCGCCGTCAATTTCTTTCCCATGTGGATGCCgtaagtggac ... aatgcatcagTCCCAACATG
EST: TTCCAACCATTCTGGCGTTTCGCCGTCAATTTCTTTCCCATGTGGATGCC TCCCAACATGEST: gi|67576663|gb|BJ949487.1|BJ949487
genomic: TTCCAACCATTCTGGCGTTTCGCCGTCAATTTCTTTCCCATGTGGATGCCgtaagtggac ... aatgcatcagTCCCAACATG
EST: TTCCAACCATTCTGGCGTTTCGCCGTCAATTTCTTTCCCATGTGGATGCC TCCCAACATGEST: gi|100441829|gb|BY981052.1|BY981052
genomic: TTCCAACCATTCTGGCGTTTCGCCGTCAATTTCTTTCCCATGTGGATGCCgtaagtggac ... aatgcatcagTCCCAACATG
EST: TTCCAACCATTCTGGCGTTTCGCCGTCAATTTCTTTCCCATGTGGATGCC TCCCAACATGEST: gi|208400731|gb|DC904909.1|DC904909
genomic: TTCCAACCATTCTGGCGTTTCGCCGTCAATTTCTTTCCCATGTGGATGCCgtaagtggac ... aatgcatcagTCCCAACATG
EST: TTCCAACCATTCTGGCGTTTCGCCGTCAATTTCTTTCCCATGTGGATGCC TCCCAACATGEST: gi|208365198|gb|DC931164.1|DC931164
genomic: TTCCAACCATTCTGGCGTTTCGCCGTCAATTTCTTTCCCATGTGGATGCCgtaagtggac ... aatgcatcagTCCCAACATG
EST: TTCCAACCATTCTGGCGTTTCGCCGTCAATTTCTTTCCCATGTGGATGCC TCCCAACATGEST: gi|100451564|gb|CJ974830.1|CJ974830
genomic: TTCCAACCATTCTGGCGTTTCGCCGTCAATTTCTTTCCCATGTGGATGCCgtaagtggac ... aatgcatcagTCCCAACATG
EST: TTCCAACCATTCTGGCGTTTCGCCGTCAATTTCTTTCCCATGTGGATGCC TCCCAACATG
genomic: TTCCAACCATTCTGGCGTTTCGCCGTCAATTTCTTTCCCATGTGGATGCCgtaagtggac ... aatgcatcagTCCCAACATG
acgccgttgttttgtgttggttggtttgggctctacttcgtgtgtaatgcatcagTCCCAACATG
ttctgac putative branch site (score: 4)
ttgtttt TA-rich tract