1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
...taatggccgaaaccttccggttgcgtgtgtggagctgttttttcgctcacaaagcttgaatctaaaccttacagacatgggcgtggctgtgtgtgtgcagTGGTCATGGCAGCTTTTCCAACAACAAGACGCTGAACAGTTTGATCGGTCACCTAACTCACTCATCCATACTTGTTCCATACCACGGGTG
species | Physcomitrella patens |
transcript | PP1S65_6V6.1 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
EST: CTGGCGCAAGGAACCATGTTTTGGGCTCTCTTCGTGCTGGGCCATGACTG TGGTCATGGCAGCTTTTCCAACAACAAGACGCTGAACAGTTTGATCGGTCAEST: gi|67508586|gb|BJ941448.1|BJ941448
genomic: CTGGCGCAAGGAACCATGTTTTGGGCTCTCTTCGTGCTGGGCCATGACTGgtaattgtac ... gtgtgtgcagTGGTCATGGCAGCTTTTCCAACAACAAGACGCTGAACAGTTTGATCGGTCA
EST: CTGGCGCAAGGAACCATGTTTTGGGCTCTCTTCGTGCTGGGCCATGACTG TGGTCATGGCAGCTTTTCCAACAACAAGACGCTGAACAGTTTGATCGGTCAEST: gi|162184125|gb|FC358871.1|FC358871
genomic: CTGGCGCAAGGAACCATGTTTTGGGCTCTCTTCGTGCTGGGCCATGACTGgtaattgtac ... gtgtgtgcagTGGTCATGGCAGCTTTTCCAACAACAAGACGCTGAACAGTTTGATCGGTCA
EST: CTGGCGCAAGGAACCATGTTTTGGGCTCTCTTCGTGCTGGGCCATGACTG TGGTCATGGCAGCTTTTCCAACAACAAGACGCTGAACAGTTTGATCGGTCAEST: gi|162225848|gb|FC402140.1|FC402140
genomic: CTGGCGCAAGGAACCATGTTTTGGGCTCTCTTCGTGCTGGGCCATGACTGgtaattgtac ... gtgtgtgcagTGGTCATGGCAGCTTTTCCAACAACAAGACGCTGAACAGTTTGATCGGTCA
EST: CTGGCGCAAGGAACCATGTTTTGGGCTCTCTTCGTGCTGGGCCATGACTG TGGTCATGGCAGCTTTTCCAACAACAAGACGCTGAACAGTTTGATCGGTCAEST: gi|162238964|gb|FC417715.1|FC417715
genomic: CTGGCGCAAGGAACCATGTTTTGGGCTCTCTTCGTGCTGGGCCATGACTGgtaattgtac ... gtgtgtgcagTGGTCATGGCAGCTTTTCCAACAACAAGACGCTGAACAGTTTGATCGGTCA
EST: CTGGCGCAAGGAACCATGTTTTGGGCTCTCTTCGTGCTGGGCCATGACTG TGGTCATGGCAGCTTTTCCAACAACAAGACGCTGAACAGTTTGATCGGTCA
genomic: CTGGCGCAAGGAACCATGTTTTGGGCTCTCTTCGTGCTGGGCCATGACTGgtaattgtac ... gtgtgtgcagTGGTCATGGCAGCTTTTCCAACAACAAGACGCTGAACAGTTTGATCGGTCA
ctcacaaagcttgaatctaaaccttacagacatgggcgtggctgtgtgtgtgcagTGGTCATGGCAGCTTTTCCAACAACAAGACGCTGAACAGTTTGATCGGTCACCTAACTCACTCATCCATACTTGTTCCATACCACGGGTG
accttac putative branch site (score: 3)
aatctaaa TA-rich tract