1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
...aaatttttgtgggaatcttaaggcttctacagcaccaatgattggcggtgattgatgtggataatggttctgaaggaattgagtcaaattttgtgcacagCCAGGAGTGTAATCCTACTTCGTTTGAAGTAAACGTTGGCTTAGTACGTGACCGAAGGCATAATTAAGGTGCGGATAGGATAGTCACGCAACACCGTGGT
species | Physcomitrella patens |
transcript | PP1S60_308V6.2 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
EST: CGGAGACTTCGCTGCCTGCCAAGTGGTCTGCACCTTATTTCCTTTCTATT CCAGGAGTGTAATCCTACTTCGTTTGAAGTAAACGTTGGCTTAGTACGTGA
genomic: CGGAGACTTCGCTGCCTGCCAAGTGGTCTGCACCTTATTTCCTTTCTATTgtaaggaact ... ttgtgcacagCCAGGAGTGTAATCCTACTTCGTTTGAAGTAAACGTTGGCTTAGTACGTGA
cggtgattgatgtggataatggttctgaaggaattgagtcaaattttgtgcacagCCAGGAGTGTAATCCTACTTCGTTTGAAGTAAACGTTGGCTTAGTACGTGACCGAAGGCATAATTAAGGTGCGGATAGGATAGTCACGCAACACCGTGGT
gattgat putative branch site (score: 4)
tcaaatttt TA-rich tract