Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|208390593|gb|DC937525.1|DC937525EST: ACCGCGTGCACTGCTCCACTGTAGTTCCTCTGCCTCTGGGATCTTGGAAG GTGAATAAGAGGCCATGCGGATTTTCTTCATTTCCGGATAAGCATTTAGTT
genomic: ACCGCGTGCACTGCTCCACTGTAGTTCCTCTGCCTCTGGGATCTTGGAAGgtatggtata ... gtatgcacagGTGAATAAGAGGCCATGCGGATTTTCTTCATTTCCGGATAAGCATTTAGTT
EST:
gi|208354782|gb|DC934342.1|DC934342EST: ACCGCGTGCACTGCTCCACTGTAGTTCCTCTGCCTCTGGGATCTTGGAAG GTGAATAAGAGGCCATGCGGATTTTCTTCATTTCCGGATAAGCATTTAGTT
genomic: ACCGCGTGCACTGCTCCACTGTAGTTCCTCTGCCTCTGGGATCTTGGAAGgtatggtata ... gtatgcacagGTGAATAAGAGGCCATGCGGATTTTCTTCATTTCCGGATAAGCATTTAGTT
EST:
gi|100390185|gb|BY952593.1|BY952593EST: ACCGCGTGCACTGCTCCACTGTAGTTCCTCTGCCTCTGGGATCTTGGAAG GTGAATAAGAGGCCATGCGGATTTTCTTCATTTCCGGATAAGCATTTAGTT
genomic: ACCGCGTGCACTGCTCCACTGTAGTTCCTCTGCCTCTGGGATCTTGGAAGgtatggtata ... gtatgcacagGTGAATAAGAGGCCATGCGGATTTTCTTCATTTCCGGATAAGCATTTAGTT
EST:
gi|100379030|gb|BY986539.1|BY986539EST: ACCGCGTGCACTGCTCCACTGTAGTTCCTCTGCCTCTGGGATCTTGGAAG GTGAATAAGAGGCCATGCGGATTTTCTTCATTTCCGGATAAGCATTTAGTT
genomic: ACCGCGTGCACTGCTCCACTGTAGTTCCTCTGCCTCTGGGATCTTGGAAGgtatggtata ... gtatgcacagGTGAATAAGAGGCCATGCGGATTTTCTTCATTTCCGGATAAGCATTTAGTT
EST:
gi|100380500|gb|BY986716.1|BY986716EST: ACCGCGTGCACTGCTCCACTGTAGTTCCTCTGCCTCTGGGATCTTGGAAG GTGAATAAGAGGCCATGCGGATTTTCTTCATTTCCGGATAAGCATTTAGTT
genomic: ACCGCGTGCACTGCTCCACTGTAGTTCCTCTGCCTCTGGGATCTTGGAAGgtatggtata ... gtatgcacagGTGAATAAGAGGCCATGCGGATTTTCTTCATTTCCGGATAAGCATTTAGTT
EST:
gi|67570382|gb|BJ943206.1|BJ943206EST: ACCGCGTGCACTGCTCCACTGTAGTTCCTCTGCCTCTGGGATCTTGGAAG GTGAATAAGAGGCCATGCGGATTTTCTTCATTTCCGGATAAGCATTTAGTT
genomic: ACCGCGTGCACTGCTCCACTGTAGTTCCTCTGCCTCTGGGATCTTGGAAGgtatggtata ... gtatgcacagGTGAATAAGAGGCCATGCGGATTTTCTTCATTTCCGGATAAGCATTTAGTT
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
ctgaatgtaatgttcaaaattagtgcaaatccttgcctctttcatattgcattaggatttggaatttcatttgcaacagttggatggtttgtatgcacagGTGAATAAGAGGCCATGCGGATTTTCTTCATTTCCGGATAAGCATTTAGTTGGAGGCAGGGTAAGGATTTTTCAAGTACCTGGTGCAGATTCAGACATAT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAGG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCAGAT