Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|162239453|gb|FC416813.1|FC416813EST: TCTGGCTCATCTTTCATGCAGTCTCGCACACCGACGTCATTCTTTGGAAG ATTGCCCAGAGAAATGGCGTGCGTACTATCTTTACTGCCTTTGCACAATGC
genomic: TCTGGCTCATCTTTCATGCAGTCTCGCACACCGACGTCATTCTTTGGAAGgtgtgcttga ... tggtttatagATTGCCCAGAGAAATGGCGTGCGTACTATCTTTACTGCCTTTGCACAATGC
EST:
gi|162247054|gb|FC422228.1|FC422228EST: TCTGGCTCATCTTTCATGCAGTCTCGCACACCGACGTCATTCTTTGGAAG ATTGCCCAGAGAAATGGCGTGCGTACTATCTTTACTGCCTTTGCACAATGC
genomic: TCTGGCTCATCTTTCATGCAGTCTCGCACACCGACGTCATTCTTTGGAAGgtgtgcttga ... tggtttatagATTGCCCAGAGAAATGGCGTGCGTACTATCTTTACTGCCTTTGCACAATGC
EST:
gi|162239454|gb|FC416814.1|FC416814EST: TCTGGCTCATCTTTCATGCAGTCTCGCACACCGACGTCATTCTTTGGAAG ATTGCCCAGAGAAATGGCGTGCGTACTATCTTTACTGCCTTTGCACAATGC
genomic: TCTGGCTCATCTTTCATGCAGTCTCGCACACCGACGTCATTCTTTGGAAGgtgtgcttga ... tggtttatagATTGCCCAGAGAAATGGCGTGCGTACTATCTTTACTGCCTTTGCACAATGC
EST:
gi|37832399|gb|BJ590411.1|BJ590411EST: TCATGCAGTCTCGGCACACCGACGTCATTCTTTGGAAG ATTGCCCAGAGAAATGGCGTGCGTACTATCTTTACTGCCTTTGCACAATGC
genomic: TCATGCAGTCTC-GCACACCGACGTCATTCTTTGGAAGgtgtgcttga ... tggtttatagATTGCCCAGAGAAATGGCGTGCGTACTATCTTTACTGCCTTTGCACAATGC
EST:
gi|18355454|gb|BJ187513.1|BJ187513EST: TCTGGCTCATCTTTCATGCAGTCTCGCACACCGACGTCATTCTTTGGAAG ATTGCCCAGAGAAATGGCGTGCGTACTATCTTTACTGCCTTTGCACAATGC
genomic: TCTGGCTCATCTTTCATGCAGTCTCGCACACCGACGTCATTCTTTGGAAGgtgtgcttga ... tggtttatagATTGCCCAGAGAAATGGCGTGCGTACTATCTTTACTGCCTTTGCACAATGC
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
cggttctggaatcacaaggtcatgaaaggttatagaagttcatgcggcgtctctcgtcttttgctgactgtaactgtcctctgtcattgttggtttatagATTGCCCAGAGAAATGGCGTGCGTACTATCTTTACTGCCTTTGCACAATGCAACAGCTTCATCGCAAATCGTGTCCCAGCTCCGCTCCTCACCAGGCGCT
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