1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
...tacagagctagaaacagtaaccttaaaacatgtgagccagacattgaaactgttgcttccatgctgatctagtgtgttgcgcgtgtcatatgttcaacagATGTGCCTCTTACGAACTGCTACAGAAGCTTCATGAATCACACAGCAATTGGCCTTTAAATCGTATGGCTTAACTTTTGATAGCAACCCTTCTACAAGAG
species | Physcomitrella patens |
transcript | PP1S48_141V6.2 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
EST: GGGATAACCATGCGGCCGCAACTAGAGTAACGACGCGGCGCGGTGAGCAG ATGTGCCTCTTACGAACTGCTACAGAAGCTTCATGAATCACACAGCAATTGEST: gi|18341954|gb|BJ173989.1|BJ173989
genomic: GGGATAACCATGCGGCCGCAACTAGAGTAACGACGCGGCGCGGTGAGCAGgtagatcttg ... tgttcaacagATGTGCCTCTTACGAACTGCTACAGAAGCTTCATGAATCACACAGCAATTG
EST: GGGATAACCATGCGGCCGCAACTAGAGTAACGACGCGGCGCGGTGAGCAG ATGTGCCTCTTACGAACTGCTACAGAAGCTTCATGAATCACACAGCAATTG
genomic: GGGATAACCATGCGGCCGCAACTAGAGTAACGACGCGGCGCGGTGAGCAGgtagatcttg ... tgttcaacagATGTGCCTCTTACGAACTGCTACAGAAGCTTCATGAATCACACAGCAATTG
gaaactgttgcttccatgctgatctagtgtgttgcgcgtgtcatatgttcaacagATGTGCCTCTTACGAACTGCTACAGAAGCTTCATGAATCACACAGCAATTGGCCTTTAAATCGTATGGCTTAACTTTTGATAGCAACCCTTCTACAAGAG
tgctgat putative branch site (score: 5)
atatgtt TA-rich tract