Sequence
atgc intronic sequence ATGC exonic sequence...tactagggtcaatcagccaagtcttctttacatagttttaatctcagcttgctcatcaactcatgtattacttttaaaagacttggaatctatatttcagGTATTTTCGAACCAAAGGGGATAAAAGTGCCGAACCCCGTGCAGACTGTATGCACACGATGGGGAAGCGATCATCTTTGTTTTGGTTCATACTCGAACGT
Basic information
species | Physcomitrella patens |
transcript | PP1S48_113V6.1 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|162185330|gb|FC360904.1|FC360904EST: GTCCACTACCCCAGTTGAAGCTGTAACGCGTGTTATGACCATCCTGAGAG GTATTTTCGAACCAAATGGGATAAAAGTGCCGAACCCCGTGCAGACTGTAT
genomic: GTCCACTACCCCAGTTGAAGCTGTAACGCGTGTTATGACCATCCTGAGAGgtacgtcaat ... tatatttcagGTATTTTCGAACCAAAGGGGATAAAAGTGCCGAACCCCGTGCAGACTGTAT
atgc intronic sequence ATGC exonic sequenceIntronic sequence truncated to 55 bases.agcttgctcatcaactcatgtattacttttaaaagacttggaatctatatttcagGTATTTTCGAACCAAAGGGGATAAAAGTGCCGAACCCCGTGCAGACTGTATGCACACGATGGGGAAGCGATCATCTTTGTTTTGGTTCATACTCGAACGT
atgtattacttttaaa TA-rich tract