Skip to another splice site:
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 5'  3'   		2  
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 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

...tcactcatgtcatatctgttgtgagtagcgtttaagtcgcggtccgatatcacccactgcacgtgatatgcctcacacttgtcgcgtttgtcttgtgcagCTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGCCCTGCTCGTACCCTACTTGGCCCTGCAGCTGCCAGGCTTCATCTTCGAC

Basic information

species Physcomitrella patens
transcript PP1S47_88V6.1
intron # 1
splice site 3'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|162261394|gb|FC438230.1|FC438230
EST:     GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCAT                         CTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
genomic: GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCATgtgagtcctg ... tcttgtgcagCTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
EST: gi|162217301|gb|FC392041.1|FC392041
EST:     GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCAT                         CTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
genomic: GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCATgtgagtcctg ... tcttgtgcagCTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
EST: gi|162269950|gb|FC445948.1|FC445948
EST:     GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCAT                         CTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
genomic: GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCATgtgagtcctg ... tcttgtgcagCTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
EST: gi|162280075|gb|FC456469.1|FC456469
EST:     GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCAT                         CTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
genomic: GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCATgtgagtcctg ... tcttgtgcagCTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
EST: gi|162280449|gb|FC456362.1|FC456362
EST:     ACATTTTGCAGTGGCTTGCCGTTATTGCTGCCAT                         CTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
genomic: ACATTTTGCAGTGGCTTGCCGTTATTGCTGCCATgtgagtcctg ... tcttgtgcagCTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
EST: gi|18331116|gb|BJ163122.1|BJ163122
EST:     GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCAT                         CTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
genomic: GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCATgtgagtcctg ... tcttgtgcagCTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
EST: gi|162200424|gb|FC376085.1|FC376085
EST:     GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCAT                         CTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
genomic: GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCATgtgagtcctg ... tcttgtgcagCTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
EST: gi|162277077|gb|FC453799.1|FC453799
EST:     GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCAT                         CTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
genomic: GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCATgtgagtcctg ... tcttgtgcagCTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
EST: gi|162202412|gb|FC380005.1|FC380005
EST:     GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCAT                         CTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
genomic: GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCATgtgagtcctg ... tcttgtgcagCTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
EST: gi|162272320|gb|FC448192.1|FC448192
EST:     GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCAT                         CTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
genomic: GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCATgtgagtcctg ... tcttgtgcagCTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
EST: gi|162181357|gb|FC357087.1|FC357087
EST:     GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCAT                         CTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
genomic: GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCATgtgagtcctg ... tcttgtgcagCTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
EST: gi|162261741|gb|FC437030.1|FC437030
EST:     GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCAT                         CTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
genomic: GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCATgtgagtcctg ... tcttgtgcagCTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
EST: gi|162261827|gb|FC438351.1|FC438351
EST:     GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCAT                         CTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
genomic: GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCATgtgagtcctg ... tcttgtgcagCTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
EST: gi|162210568|gb|FC386256.1|FC386256
EST:     GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCAT                         CTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
genomic: GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCATgtgagtcctg ... tcttgtgcagCTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
EST: gi|162226271|gb|FC402979.1|FC402979
EST:     GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCAT                         CTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
genomic: GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCATgtgagtcctg ... tcttgtgcagCTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
EST: gi|208348633|gb|DC913277.1|DC913277
EST:     GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCAT                         CTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
genomic: GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCATgtgagtcctg ... tcttgtgcagCTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
EST: gi|67719090|gb|BJ969349.1|BJ969349
EST:     GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCAT                         CTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
genomic: GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCATgtgagtcctg ... tcttgtgcagCTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
EST: gi|162232238|gb|FC408074.1|FC408074
EST:     GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCAT                         CTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
genomic: GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCATgtgagtcctg ... tcttgtgcagCTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
EST: gi|162278310|gb|FC454188.1|FC454188
EST:     GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCAT                         CTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
genomic: GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCATgtgagtcctg ... tcttgtgcagCTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
EST: gi|162240227|gb|FC414311.1|FC414311
EST:     GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCAT                         CTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
genomic: GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCATgtgagtcctg ... tcttgtgcagCTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
EST: gi|162203300|gb|FC379579.1|FC379579
EST:     GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCAT                         CTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
genomic: GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCATgtgagtcctg ... tcttgtgcagCTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
EST: gi|67575645|gb|BJ948469.1|BJ948469
EST:     GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCAT                         CTATCTGTTGGTGTTGGACAGAA
genomic: GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCATgtgagtcctg ... tcttgtgcagCTATCTGTTGGTGTTGGACAGAA
EST: gi|162269922|gb|FC445933.1|FC445933
EST:     GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCAT                         CTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
genomic: GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCATgtgagtcctg ... tcttgtgcagCTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
EST: gi|162261395|gb|FC438231.1|FC438231
EST:     GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCAT                         CTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
genomic: GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCATgtgagtcctg ... tcttgtgcagCTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
EST: gi|162280450|gb|FC456363.1|FC456363
EST:     GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCAT                         CTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
genomic: GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCATgtgagtcctg ... tcttgtgcagCTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
EST: gi|162191750|gb|FC367483.1|FC367483
EST:     GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCAT                         CTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
genomic: GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCATgtgagtcctg ... tcttgtgcagCTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
EST: gi|162224318|gb|FC400162.1|FC400162
EST:     GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCAT                         CTATCAGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
genomic: GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCATgtgagtcctg ... tcttgtgcagCTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
EST: gi|162269163|gb|FC445031.1|FC445031
EST:     GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCAT                         CTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
genomic: GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCATgtgagtcctg ... tcttgtgcagCTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
EST: gi|162232237|gb|FC408073.1|FC408073
EST:     GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCAT                         CTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
genomic: GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCATgtgagtcctg ... tcttgtgcagCTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
EST: gi|162277501|gb|FC453444.1|FC453444
EST:     GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCAT                         CTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
genomic: GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCATgtgagtcctg ... tcttgtgcagCTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
EST: gi|162217302|gb|FC392042.1|FC392042
EST:     GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCAT                         CTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
genomic: GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCATgtgagtcctg ... tcttgtgcagCTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
EST: gi|208396916|gb|DC920456.1|DC920456
EST:     GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCAT                         CTATCTGTTGGTGTAGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
genomic: GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCATgtgagtcctg ... tcttgtgcagCTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
EST: gi|162260427|gb|FC435053.1|FC435053
EST:     GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCAT                         CTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
genomic: GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCATgtgagtcctg ... tcttgtgcagCTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
EST: gi|208346160|gb|DC917113.1|DC917113
EST:     GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCAT                         CTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
genomic: GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCATgtgagtcctg ... tcttgtgcagCTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
EST: gi|162244852|gb|FC424663.1|FC424663
EST:     GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCAT                         CTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
genomic: GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCATgtgagtcctg ... tcttgtgcagCTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
EST: gi|162241773|gb|FC417300.1|FC417300
EST:     GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCAT                         CTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
genomic: GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCATgtgagtcctg ... tcttgtgcagCTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
EST: gi|162272321|gb|FC448193.1|FC448193
EST:     GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCAT                         CTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
genomic: GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCATgtgagtcctg ... tcttgtgcagCTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
EST: gi|162264150|gb|FC440212.1|FC440212
EST:     GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCAT                         CTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
genomic: GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCATgtgagtcctg ... tcttgtgcagCTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
EST: gi|208377350|gb|DC927038.1|DC927038
EST:     GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCAT                         CTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
genomic: GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCATgtgagtcctg ... tcttgtgcagCTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
EST: gi|67702941|gb|BJ963174.1|BJ963174
EST:     GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCAT                         CTATCTGTTGGTGTTGGA
genomic: GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCATgtgagtcctg ... tcttgtgcagCTATCTGTTGGTGTTGGA
EST: gi|162258666|gb|FC434361.1|FC434361
EST:     GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCAT                         CTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
genomic: GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCATgtgagtcctg ... tcttgtgcagCTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
EST: gi|162269162|gb|FC445030.1|FC445030
EST:     GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCAT                         CTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
genomic: GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCATgtgagtcctg ... tcttgtgcagCTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
EST: gi|162272778|gb|FC447975.1|FC447975
EST:     GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCAT                         CTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
genomic: GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCATgtgagtcctg ... tcttgtgcagCTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
EST: gi|162260426|gb|FC435052.1|FC435052
EST:     GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCAT                         CTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
genomic: GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCATgtgagtcctg ... tcttgtgcagCTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
EST: gi|162280076|gb|FC456470.1|FC456470
EST:     GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCAT                         CTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
genomic: GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCATgtgagtcctg ... tcttgtgcagCTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
EST: gi|7047396|gb|AW477290.1|AW477290
EST:     GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCAT                         CTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
genomic: GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCATgtgagtcctg ... tcttgtgcagCTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
EST: gi|162200425|gb|FC376086.1|FC376086
EST:     GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCAT                         CTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
genomic: GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCATgtgagtcctg ... tcttgtgcagCTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
EST: gi|18372454|gb|BJ204056.1|BJ204056
EST:     GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCAT                         CTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
genomic: GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCATgtgagtcctg ... tcttgtgcagCTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
EST: gi|162233496|gb|FC410254.1|FC410254
EST:     GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCAT                         CTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
genomic: GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCATgtgagtcctg ... tcttgtgcagCTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
EST: gi|162276156|gb|FC452848.1|FC452848
EST:     GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCAT                         CTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
genomic: GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCATgtgagtcctg ... tcttgtgcagCTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
EST: gi|162277453|gb|FC452980.1|FC452980
EST:     GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCAT                         CTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
genomic: GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCATgtgagtcctg ... tcttgtgcagCTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
EST: gi|208380613|gb|DC903203.1|DC903203
EST:     GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCAT                         CTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
genomic: GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCATgtgagtcctg ... tcttgtgcagCTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
EST: gi|162234141|gb|FC410355.1|FC410355
EST:     GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCAT                         CTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
genomic: GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCATgtgagtcctg ... tcttgtgcagCTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
EST: gi|162228041|gb|FC405662.1|FC405662
EST:     GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCAT                         CTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
genomic: GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCATgtgagtcctg ... tcttgtgcagCTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
EST: gi|162262144|gb|FC437913.1|FC437913
EST:     GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCAT                         CTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
genomic: GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCATgtgagtcctg ... tcttgtgcagCTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
EST: gi|162181356|gb|FC357086.1|FC357086
EST:     ACATTTTGCAGTGGCTTGCCGTTATTGCTGCCAT                         CTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
genomic: ACATTTTGCAGTGGCTTGCCGTTATTGCTGCCATgtgagtcctg ... tcttgtgcagCTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
EST: gi|162234270|gb|FC409808.1|FC409808
EST:     GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCAT                         CTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
genomic: GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCATgtgagtcctg ... tcttgtgcagCTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
EST: gi|162253015|gb|FC429076.1|FC429076
EST:     GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCAT                         CTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
genomic: GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCATgtgagtcctg ... tcttgtgcagCTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
EST: gi|162279710|gb|FC455618.1|FC455618
EST:     GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCAT                         CTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
genomic: GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCATgtgagtcctg ... tcttgtgcagCTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
EST: gi|162269923|gb|FC445934.1|FC445934
EST:     GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCAT                         CTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
genomic: GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCATgtgagtcctg ... tcttgtgcagCTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
EST: gi|162239656|gb|FC418017.1|FC418017
EST:     GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCAT                         CTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
genomic: GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCATgtgagtcctg ... tcttgtgcagCTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
EST: gi|162259640|gb|FC436490.1|FC436490
EST:     GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCAT                         CTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
genomic: GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCATgtgagtcctg ... tcttgtgcagCTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
EST: gi|162262822|gb|FC439267.1|FC439267
EST:     GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCAT                         CTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
genomic: GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCATgtgagtcctg ... tcttgtgcagCTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
EST: gi|162234522|gb|FC410788.1|FC410788
EST:     GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCAT                         CTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
genomic: GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCATgtgagtcctg ... tcttgtgcagCTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
EST: gi|19784708|gb|BQ040227.1|BQ040227
EST:     GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCAT                         CTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
genomic: GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCATgtgagtcctg ... tcttgtgcagCTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
EST: gi|162244153|gb|FC423756.1|FC423756
EST:     GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCAT                         CTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
genomic: GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCATgtgagtcctg ... tcttgtgcagCTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
EST: gi|162272779|gb|FC447976.1|FC447976
EST:     GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCAT                         CTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
genomic: GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCATgtgagtcctg ... tcttgtgcagCTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
EST: gi|162213556|gb|FC389428.1|FC389428
EST:     GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCAT                         CTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
genomic: GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCATgtgagtcctg ... tcttgtgcagCTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
EST: gi|162241772|gb|FC417299.1|FC417299
EST:     GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCAT                         CTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
genomic: GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCATgtgagtcctg ... tcttgtgcagCTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
EST: gi|162253014|gb|FC429075.1|FC429075
EST:     GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCAT                         CTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
genomic: GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCATgtgagtcctg ... tcttgtgcagCTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
EST: gi|162191749|gb|FC367482.1|FC367482
EST:     GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCAT                         CTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
genomic: GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCATgtgagtcctg ... tcttgtgcagCTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
EST: gi|162202413|gb|FC380006.1|FC380006
EST:     GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCAT                         CTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
genomic: GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCATgtgagtcctg ... tcttgtgcagCTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
EST: gi|162261828|gb|FC438352.1|FC438352
EST:     GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCAT                         CTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
genomic: GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCATgtgagtcctg ... tcttgtgcagCTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
EST: gi|162244154|gb|FC423757.1|FC423757
EST:     GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCAT                         CTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
genomic: GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCATgtgagtcctg ... tcttgtgcagCTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
EST: gi|162279709|gb|FC455617.1|FC455617
EST:     GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCAT                         CTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
genomic: GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCATgtgagtcctg ... tcttgtgcagCTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
EST: gi|162203299|gb|FC379578.1|FC379578
EST:     GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCAT                         CTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
genomic: GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCATgtgagtcctg ... tcttgtgcagCTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
EST: gi|208346494|gb|DC917447.1|DC917447
EST:     GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCAT                         CTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
genomic: GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCATgtgagtcctg ... tcttgtgcagCTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
EST: gi|162234168|gb|FC410356.1|FC410356
EST:     GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCAT                         CTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
genomic: GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCATgtgagtcctg ... tcttgtgcagCTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
EST: gi|162276145|gb|FC452837.1|FC452837
EST:     GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCAT                         CTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
genomic: GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCATgtgagtcctg ... tcttgtgcagCTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
EST: gi|162234269|gb|FC409807.1|FC409807
EST:     GGCCGTACCTGGGGCGACATTTTGCAGTGGCTGGCCGTTATTGCTGCCAT                         CTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
genomic: GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCATgtgagtcctg ... tcttgtgcagCTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
EST: gi|18325276|gb|BJ157272.1|BJ157272
EST:     GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCAT                         CTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
genomic: GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCATgtgagtcctg ... tcttgtgcagCTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
EST: gi|15320092|gb|BI487638.1|BI487638
EST:     GCCGATATTGCTGCCAT                         CTATCTGTTGGTGATGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
genomic: GCCGTTATTGCTGCCATgtgagtcctg ... tcttgtgcagCTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
EST: gi|100370523|gb|BY985451.1|BY985451
EST:     GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCAT                         CCATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
genomic: GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCATgtgagtcctg ... tcttgtgcagCTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
EST: gi|67727407|gb|BJ977666.1|BJ977666
EST:     CCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCAT                         CTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
genomic: CCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCATgtgagtcctg ... tcttgtgcagCTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
EST: gi|18360098|gb|BJ192160.1|BJ192160
EST:     GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCAT                         CTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
genomic: GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCATgtgagtcctg ... tcttgtgcagCTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
EST: gi|162277502|gb|FC453445.1|FC453445
EST:     GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCAT                         CTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
genomic: GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCATgtgagtcctg ... tcttgtgcagCTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
EST: gi|162226272|gb|FC402980.1|FC402980
EST:     GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCAT                         CTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
genomic: GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCATgtgagtcctg ... tcttgtgcagCTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
EST: gi|162276222|gb|FC452082.1|FC452082
EST:     GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCAT                         CTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
genomic: GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCATgtgagtcctg ... tcttgtgcagCTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
EST: gi|162239657|gb|FC418018.1|FC418018
EST:     GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCAT                         CTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
genomic: GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCATgtgagtcctg ... tcttgtgcagCTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
EST: gi|162233495|gb|FC410253.1|FC410253
EST:     GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCAT                         CTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
genomic: GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCATgtgagtcctg ... tcttgtgcagCTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
EST: gi|162277454|gb|FC452981.1|FC452981
EST:     GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCAT                         CTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
genomic: GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCATgtgagtcctg ... tcttgtgcagCTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
EST: gi|162276157|gb|FC452849.1|FC452849
EST:     GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCAT                         CTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
genomic: GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCATgtgagtcctg ... tcttgtgcagCTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
EST: gi|18374647|gb|BJ206225.1|BJ206225
EST:     GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCAT                         CTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
genomic: GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCATgtgagtcctg ... tcttgtgcagCTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
EST: gi|7648292|gb|AW739275.1|AW739275
EST:     CGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCAT                         CTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
genomic: CGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCATgtgagtcctg ... tcttgtgcagCTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
EST: gi|162244851|gb|FC424662.1|FC424662
EST:     GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCAT                         CTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
genomic: GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCATgtgagtcctg ... tcttgtgcagCTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
EST: gi|162278311|gb|FC454189.1|FC454189
EST:     GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCAT                         CTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
genomic: GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCATgtgagtcctg ... tcttgtgcagCTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
EST: gi|162219100|gb|FC394683.1|FC394683
EST:     GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCAT                         CTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
genomic: GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCATgtgagtcctg ... tcttgtgcagCTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
EST: gi|162262143|gb|FC437912.1|FC437912
EST:     GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCAT                         CTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
genomic: GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCATgtgagtcctg ... tcttgtgcagCTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
EST: gi|67699123|gb|BJ959356.1|BJ959356
EST:     GTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCAT                         CTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
genomic: GTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCATgtgagtcctg ... tcttgtgcagCTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
EST: gi|162213555|gb|FC389427.1|FC389427
EST:     GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCAT                         CTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
genomic: GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCATgtgagtcctg ... tcttgtgcagCTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
EST: gi|162206978|gb|FC382987.1|FC382987
EST:     GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCAT                         CTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
genomic: GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCATgtgagtcctg ... tcttgtgcagCTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
EST: gi|162219101|gb|FC394684.1|FC394684
EST:     GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCAT                         CTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
genomic: GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCATgtgagtcctg ... tcttgtgcagCTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
EST: gi|18340940|gb|BJ172971.1|BJ172971
EST:     GACATTTTGCAGTGGCTTGCCGTTATTGCTGCCAT                         CTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
genomic: GACATTTTGCAGTGGCTTGCCGTTATTGCTGCCATgtgagtcctg ... tcttgtgcagCTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
EST: gi|162258667|gb|FC434362.1|FC434362
EST:     GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCAT                         CTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC
genomic: GGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCATgtgagtcctg ... tcttgtgcagCTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGC

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 1 RNA-Seqlibrary.


Block sizes: 34 (upstream exon), 35 (downstream exon)
Score: 50

GGGAGGCCTTGAGCAACTTGAGCTCACACGCCCTGCTTGCTCTTGGACTCGGCCGTACCTGGGGCGACATTTTGCAGTGGCTTGCCGTTATTGCTGCCATgtgagtcctg ... tcttgtgcagCTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGCCCTGCTCGTACCCTACTTGGCCCTGCAGCTGCCAGGCTTCATCTTCGAC




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 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

gatatcacccactgcacgtgatatgcctcacacttgtcgcgtttgtcttgtgcagCTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGCCCTGCTCGTACCCTACTTGGCCCTGCAGCTGCCAGGCTTCATCTTCGAC
                        gcctcac  putative branch site (score: 50)
                                         tttgtctt  putative PPT
















Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
tcactcatgtcatatctgttgtgagtagcgtttaagtcgcggtccgatatcacccactgcacgtgatatgcctcacacttgtcgcgtttgtcttgtgcagCTATCTGTTGGTGTTGGACAGAACCAACTGGAGGACAAACTTGTTGACCGCCCTGCTCGTACCCTACTTGGCCCTGCAGCTGCCAGGCTTCATCTTCGAC

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  CTGCAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  GCAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAGCTG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  AGCTGC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - ctgcacg