1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
gtactactcactttctcctttcctgtcccaaaattatgctttgttattgaatatgtgcgctgcgttgtggtgctggtttgaaccaggactgaaacctaattccggccacatttggattgaggaaatgagacaatttgtttgcgtatgcagGCGGACGCTGCAGAAGTTGAGATTGCTCAACCCAAGAAAAGAACCTTTAAGAAGTTTACTTTCCGCGGCGTCGATCTCGATGCTCTCCTCGACATGAGCA
species | Physcomitrella patens |
transcript | PP1S47_42V6.1 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
EST: ACCAGCCGCTGCGTCGAACTCGCACTTGTTTCACTGCATTCTTCACCATG GCGGACGCTGCAGAAGTTGAGATTGCTCAACCCAAGAAAAGAACCTTTAAGEST: gi|7067374|gb|AW497229.1|AW497229
genomic: ACCAGCCGCTGCGTCGAACTCGCACTTGTTTCACTGCATTCTTCACCATGgtactactca ... gcgtatgcagGCGGACGCTGCAGAAGTTGAGATTGCTCAACCCAAGAAAAGAACCTTTAAG
EST: ACCAGCCGCTGCGTCGAACTCGCACTTGTTTCACTGCATTCTTCACCATG GCGGACGCTGCAGAAGTTGAGATTGCTCAACCCAAGAAAAGAACCTTTAAGEST: gi|162227580|gb|FC403522.1|FC403522
genomic: ACCAGCCGCTGCGTCGAACTCGCACTTGTTTCACTGCATTCTTCACCATGgtactactca ... gcgtatgcagGCGGACGCTGCAGAAGTTGAGATTGCTCAACCCAAGAAAAGAACCTTTAAG
EST: ACCAGCCGCTGCGTCGAACTCGCACTTGTTTCACTGCATTCTTCACCATG GCGGACGCTGCAGAAGTTGAGATTGCTCAACCCAAGAAAAGAACCTTTAAGEST: gi|67702997|gb|BJ963230.1|BJ963230
genomic: ACCAGCCGCTGCGTCGAACTCGCACTTGTTTCACTGCATTCTTCACCATGgtactactca ... gcgtatgcagGCGGACGCTGCAGAAGTTGAGATTGCTCAACCCAAGAAAAGAACCTTTAAG
EST: ACCAGCCGCTGCGTCGAACTCGCACTTGTTTCACTGCATTCTTCACCATG GCGGACGCTGCAGAAGTTGAGATTGCTCAACCCAAGAAAAGAACCTTTAAGEST: gi|7147695|gb|AW509666.1|AW509666
genomic: ACCAGCCGCTGCGTCGAACTCGCACTTGTTTCACTGCATTCTTCACCATGgtactactca ... gcgtatgcagGCGGACGCTGCAGAAGTTGAGATTGCTCAACCCAAGAAAAGAACCTTTAAG
EST: ACCAGCCGCTGCGTCGAACTCGCACTTGTTTCACTGCATTCTTCACCATG GCGGACGCTGCAGAAGTTGAGATTGCTCAACCCAAGAAAAGAACCTTTAAGEST: gi|162227187|gb|FC403844.1|FC403844
genomic: ACCAGCCGCTGCGTCGAACTCGCACTTGTTTCACTGCATTCTTCACCATGgtactactca ... gcgtatgcagGCGGACGCTGCAGAAGTTGAGATTGCTCAACCCAAGAAAAGAACCTTTAAG
EST: CCAGCCGCTGCGTCGAACTCGCACTTGTTTCACTGCATTCTTCACCATG GCGGACGCTGCAGAAGTTGAGATTGCTCAACCCAAGAAAAGAACCTTTAAGEST: gi|162221336|gb|FC398120.1|FC398120
genomic: CCAGCCGCTGCGTCGAACTCGCACTTGTTTCACTGCATTCTTCACCATGgtactactca ... gcgtatgcagGCGGACGCTGCAGAAGTTGAGATTGCTCAACCCAAGAAAAGAACCTTTAAG
EST: ACCAGCCGCTGCGTCGAACTCGCACTTGTTTCACTGCATTCTTCACCATG GCGGACGCTGCAGAAGTTGAGATTGCTCAACCCAAGAAAAGAACCTTTAAGEST: gi|162233580|gb|FC410962.1|FC410962
genomic: ACCAGCCGCTGCGTCGAACTCGCACTTGTTTCACTGCATTCTTCACCATGgtactactca ... gcgtatgcagGCGGACGCTGCAGAAGTTGAGATTGCTCAACCCAAGAAAAGAACCTTTAAG
EST: ACCAGCCGCTGCGTCGAACTCGCACTTGTTTCACTGCATTCTTCACCATG GCGGACGCTGCAGAAGTTGAGATTGCTCAACCCAAGAAAAGAACCTTTAAGEST: gi|67701344|gb|BJ961577.1|BJ961577
genomic: ACCAGCCGCTGCGTCGAACTCGCACTTGTTTCACTGCATTCTTCACCATGgtactactca ... gcgtatgcagGCGGACGCTGCAGAAGTTGAGATTGCTCAACCCAAGAAAAGAACCTTTAAG
EST: ACCAGCCGCTGCGTCGAACTCGCACTTGTTTCACTGCATTCTTCACCATG GCGGACGCTGCAGAAGTTGAGATTGCTCAACCCAAGAAAAGAACCTTTAAGEST: gi|67724173|gb|BJ974432.1|BJ974432
genomic: ACCAGCCGCTGCGTCGAACTCGCACTTGTTTCACTGCATTCTTCACCATGgtactactca ... gcgtatgcagGCGGACGCTGCAGAAGTTGAGATTGCTCAACCCAAGAAAAGAACCTTTAAG
EST: ACCAGCCGCTGCGTCGAACTCGCACTTGTTTCACTGCATTCTTCACCATG GCGGACGCTGCAGAAGTTGAGATTGCTCAACCCAAGAAAAGAACCTTTAAGEST: gi|162264291|gb|FC441393.1|FC441393
genomic: ACCAGCCGCTGCGTCGAACTCGCACTTGTTTCACTGCATTCTTCACCATGgtactactca ... gcgtatgcagGCGGACGCTGCAGAAGTTGAGATTGCTCAACCCAAGAAAAGAACCTTTAAG
EST: CATTCTTCACCATG GCGGACGCTGCAGAAGTTGAGATTGCTCAACCCAAGAAAAGAACCTTTAAGEST: gi|162277884|gb|FC454347.1|FC454347
genomic: CATTCTTCACCATGgtactactca ... gcgtatgcagGCGGACGCTGCAGAAGTTGAGATTGCTCAACCCAAGAAAAGAACCTTTAAG
EST: -CCAGCCGCTGCGTCGAACTCGCACTTGTTTCACTGCATTCTTCACCATG GCGGACGCTGCAGAAGTTGAGATTGCTCAACCCAAGAAAAGAACCTTTAAGEST: gi|162215437|gb|FC391933.1|FC391933
genomic: ACCAGCCGCTGCGTCGAACTCGCACTTGTTTCACTGCATTCTTCACCATGgtactactca ... gcgtatgcagGCGGACGCTGCAGAAGTTGAGATTGCTCAACCCAAGAAAAGAACCTTTAAG
EST: ACCAGCCGCTGCGTCGAACTCGCACTTGTTTCACTGCATTCTTCACCATG GCGGACGCTGCAGAAGTTGAGATTGCTCAACCCAAGAAAAGAACCTTTAAGEST: gi|162232848|gb|FC407501.1|FC407501
genomic: ACCAGCCGCTGCGTCGAACTCGCACTTGTTTCACTGCATTCTTCACCATGgtactactca ... gcgtatgcagGCGGACGCTGCAGAAGTTGAGATTGCTCAACCCAAGAAAAGAACCTTTAAG
EST: ACCAGCCGCTGCGTCGAACTCGCACTTGTTTCACTGCATTCTTCACCATG GCGGACGCTGCAGAAGTTGAGATTGCTCAACCCAAGAAAAGAACCTTTAAGEST: gi|19790792|gb|BQ042057.1|BQ042057
genomic: ACCAGCCGCTGCGTCGAACTCGCACTTGTTTCACTGCATTCTTCACCATGgtactactca ... gcgtatgcagGCGGACGCTGCAGAAGTTGAGATTGCTCAACCCAAGAAAAGAACCTTTAAG
EST: ACCAGCCGCTGCGTCGAACTCGCACTTGTTTCACTGCATTCTTCACCATG GCGGACGCTGCAGAAGTTGAGATTGCTCAACCCAAGAAAAGAACCTTTAAGEST: gi|67726407|gb|BJ976666.1|BJ976666
genomic: ACCAGCCGCTGCGTCGAACTCGCACTTGTTTCACTGCATTCTTCACCATGgtactactca ... gcgtatgcagGCGGACGCTGCAGAAGTTGAGATTGCTCAACCCAAGAAAAGAACCTTTAAG
EST: ACCAGCCGCTGCGTCGAACTCGCACTTGTTTCACTGCATTCTTCACCATG GCGGACGCTGCAGAAGTTGAGATTGCTCAACCCAAGAAAAGAACCTTTAAGEST: gi|7067085|gb|AW496940.1|AW496940
genomic: ACCAGCCGCTGCGTCGAACTCGCACTTGTTTCACTGCATTCTTCACCATGgtactactca ... gcgtatgcagGCGGACGCTGCAGAAGTTGAGATTGCTCAACCCAAGAAAAGAACCTTTAAG
EST: ACCAGCCGCTGCGTCGAACTCGCACTTGTTTCACTGCATTCTTCACCATG GCGGACGCTGCAGAAGTTGAGATTGCTCAACCCAAGAAAAGAACCTTTAAGEST: gi|208348761|gb|DC909796.1|DC909796
genomic: ACCAGCCGCTGCGTCGAACTCGCACTTGTTTCACTGCATTCTTCACCATGgtactactca ... gcgtatgcagGCGGACGCTGCAGAAGTTGAGATTGCTCAACCCAAGAAAAGAACCTTTAAG
EST: ACCAGCCGCTGCGTCGAACTCGCACTTGTTTCACTGCATTCTTCACCATG GCGGACGCTGCAGAAGTTGAGATTGCTCAACCCAAGAAAAGAACCTTTAAGEST: gi|162239764|gb|FC417163.1|FC417163
genomic: ACCAGCCGCTGCGTCGAACTCGCACTTGTTTCACTGCATTCTTCACCATGgtactactca ... gcgtatgcagGCGGACGCTGCAGAAGTTGAGATTGCTCAACCCAAGAAAAGAACCTTTAAG
EST: ACCAGCCGCTGCGTCGAACTCGCACTTGTTTCACTGCATTCTTCACCATG GCGGACGCTGCAGAAGTTGAGATTGCTCAACCCAAGAAAAGAACCTTTAAGEST: gi|67578444|gb|BJ950611.1|BJ950611
genomic: ACCAGCCGCTGCGTCGAACTCGCACTTGTTTCACTGCATTCTTCACCATGgtactactca ... gcgtatgcagGCGGACGCTGCAGAAGTTGAGATTGCTCAACCCAAGAAAAGAACCTTTAAG
EST: ACCAGCCGCTGCGTCGAACTCGCACTTGTTTCACTGCATTCTTCACCATG GCGGACGCTGCAGAAGTTGAGATTGCTCAACCCAAGAAAAGAACCTTTAAGEST: gi|19783351|gb|BQ039997.1|BQ039997
genomic: ACCAGCCGCTGCGTCGAACTCGCACTTGTTTCACTGCATTCTTCACCATGgtactactca ... gcgtatgcagGCGGACGCTGCAGAAGTTGAGATTGCTCAACCCAAGAAAAGAACCTTTAAG
EST: ACCAGCCGCTGCGTCGAACTCGCACTTGTTTCACTGCATTCTTCACCATG GCGGACGCTGCAGAAGTTGAGATTGCTCAACCCAAGAAAAGAACCTTTAAGEST: gi|7067375|gb|AW497230.1|AW497230
genomic: ACCAGCCGCTGCGTCGAACTCGCACTTGTTTCACTGCATTCTTCACCATGgtactactca ... gcgtatgcagGCGGACGCTGCAGAAGTTGAGATTGCTCAACCCAAGAAAAGAACCTTTAAG
EST: ACCAGCCGCTGCGTCGAACTCGCACTTGTTTCACTGCATTCTTCACCATG GCGGACGCTGCAGAAGTTGAGATTGCTCAACCCAAGAAAAGAACCTTTAAGEST: gi|208385042|gb|DC911330.1|DC911330
genomic: ACCAGCCGCTGCGTCGAACTCGCACTTGTTTCACTGCATTCTTCACCATGgtactactca ... gcgtatgcagGCGGACGCTGCAGAAGTTGAGATTGCTCAACCCAAGAAAAGAACCTTTAAG
EST: ACCAGCCGCTGCGTCGAACTCGCACTTGTTTCACTGCATTCTTCACCATG GCGGACGCTGCAGAAGTTGAGATTGCTCAACCCAAGAAAAGAACCTTTAAGEST: gi|162259872|gb|FC436007.1|FC436007
genomic: ACCAGCCGCTGCGTCGAACTCGCACTTGTTTCACTGCATTCTTCACCATGgtactactca ... gcgtatgcagGCGGACGCTGCAGAAGTTGAGATTGCTCAACCCAAGAAAAGAACCTTTAAG
EST: ACCAGCCGCTGCGTCGAACTCGCACTTGTTTCACTGCATTCTTCACCATG GCGGACGCTGCAGAAGTTGAGATTGCTCAACCCAAGAAAAGAACCTTTAAGEST: gi|162248361|gb|FC419755.1|FC419755
genomic: ACCAGCCGCTGCGTCGAACTCGCACTTGTTTCACTGCATTCTTCACCATGgtactactca ... gcgtatgcagGCGGACGCTGCAGAAGTTGAGATTGCTCAACCCAAGAAAAGAACCTTTAAG
EST: ACCAGCCGCTGCGTCGAACTCGCACTTGTTTCACTGCATTCTTCACCATG GCGGACGCTGCAGAAGTTGAGATTGCTCAACCCAAGAAAAGAACCTTTAAGEST: gi|67577697|gb|BJ949864.1|BJ949864
genomic: ACCAGCCGCTGCGTCGAACTCGCACTTGTTTCACTGCATTCTTCACCATGgtactactca ... gcgtatgcagGCGGACGCTGCAGAAGTTGAGATTGCTCAACCCAAGAAAAGAACCTTTAAG
EST: TTCACTGCATTCTTCACCATG GCGGACGCTGCAGAAGTTGAGATTGCTCAACCCANGAAAAGAACCTTTAAGEST: gi|67717901|gb|BJ968160.1|BJ968160
genomic: TTCACTGCATTCTTCACCATGgtactactca ... gcgtatgcagGCGGACGCTGCAGAAGTTGAGATTGCTCAACCCAAGAAAAGAACCTTTAAG
EST: ACCAGCCGCTGCGTCGAACTCGCACTTGTTTCACTGCATTCTTCACCATG GCGGACGCTGCAGAAGTTGAGATTGCTCAACCCAAGAAAAGAACCTTTAAGEST: gi|162235948|gb|FC411691.1|FC411691
genomic: ACCAGCCGCTGCGTCGAACTCGCACTTGTTTCACTGCATTCTTCACCATGgtactactca ... gcgtatgcagGCGGACGCTGCAGAAGTTGAGATTGCTCAACCCAAGAAAAGAACCTTTAAG
EST: ACCAGCCGCTGCGTCGAACTCGCACTTGTTTCACTGCATTCTTCACCATG GCGGACGCTGCAGAAGTTGAGATTGCTCAACCCAAGAAAAGAACCTTTAAGEST: gi|67704304|gb|BJ964537.1|BJ964537
genomic: ACCAGCCGCTGCGTCGAACTCGCACTTGTTTCACTGCATTCTTCACCATGgtactactca ... gcgtatgcagGCGGACGCTGCAGAAGTTGAGATTGCTCAACCCAAGAAAAGAACCTTTAAG
EST: ACCAGCCGCTGCGTCGAACTCGCACTTGTTTCACTGCATTCTTCACCATG GCGGACGCTGCAGAAGTTGAGATTGCTCAACCCAAGAAAAGAACCTTTAAGEST: gi|162277883|gb|FC454346.1|FC454346
genomic: ACCAGCCGCTGCGTCGAACTCGCACTTGTTTCACTGCATTCTTCACCATGgtactactca ... gcgtatgcagGCGGACGCTGCAGAAGTTGAGATTGCTCAACCCAAGAAAAGAACCTTTAAG
EST: ACCAGCCGCTGCGTCGAACTCGCACTTGTTTCACTGCATTCTTCACCATG GCGGACGCTGCAGAAGTTGAGATTGCTCAACCCAAGAAAAGAACCTTTAAGEST: gi|67710246|gb|BJ965909.1|BJ965909
genomic: ACCAGCCGCTGCGTCGAACTCGCACTTGTTTCACTGCATTCTTCACCATGgtactactca ... gcgtatgcagGCGGACGCTGCAGAAGTTGAGATTGCTCAACCCAAGAAAAGAACCTTTAAG
EST: ACCAGCCGCTGCGTCGAACTCGCACTTGTTTCACTGCATTCTTCACCATG GCGGACGCTGCAGAAGTTGAGATTGCTCAACCCAAGAAAAGAACCTTTAAGEST: gi|7207481|gb|AW561482.1|AW561482
genomic: ACCAGCCGCTGCGTCGAACTCGCACTTGTTTCACTGCATTCTTCACCATGgtactactca ... gcgtatgcagGCGGACGCTGCAGAAGTTGAGATTGCTCAACCCAAGAAAAGAACCTTTAAG
EST: ACCAGCCGCTGCGTCGAACTCGCACTTGTTTCACTGCATTCTTCACCATG GCGGACGCTGCAGAAGTTGAGATTGCTCAACCCAAGAAAAGAACCTTTAAGEST: gi|162199029|gb|FC372380.1|FC372380
genomic: ACCAGCCGCTGCGTCGAACTCGCACTTGTTTCACTGCATTCTTCACCATGgtactactca ... gcgtatgcagGCGGACGCTGCAGAAGTTGAGATTGCTCAACCCAAGAAAAGAACCTTTAAG
EST: ACCAGCCGCTGCGTCGAACTCGCACTTGTTTCACTGCATTCTTCACCATG GCGGACGCTGCAGAAGTTGAGATTGCTCAACCCAAGAAAAGAACCTTTAAGEST: gi|162227581|gb|FC403523.1|FC403523
genomic: ACCAGCCGCTGCGTCGAACTCGCACTTGTTTCACTGCATTCTTCACCATGgtactactca ... gcgtatgcagGCGGACGCTGCAGAAGTTGAGATTGCTCAACCCAAGAAAAGAACCTTTAAG
EST: ACCAGCCGCTGCGTCGAACTCGCACTTGTTTCACTGCATTCTTCACCATG GCGGACGCTGCAGAAGTTGAGATTGCTCAACCCAAGAAAAGAACCTTTAAGEST: gi|208400853|gb|DC925133.1|DC925133
genomic: ACCAGCCGCTGCGTCGAACTCGCACTTGTTTCACTGCATTCTTCACCATGgtactactca ... gcgtatgcagGCGGACGCTGCAGAAGTTGAGATTGCTCAACCCAAGAAAAGAACCTTTAAG
EST: ACCAGCCGCTGCGTCGAACTCGCACTTGTTTCACTGCATTCTTCACCATG GCGGACGCTGCAGAAGTTGAGATTGCTCAACCCAAGAAAAGAACCTTTAAGEST: gi|162225347|gb|FC401164.1|FC401164
genomic: ACCAGCCGCTGCGTCGAACTCGCACTTGTTTCACTGCATTCTTCACCATGgtactactca ... gcgtatgcagGCGGACGCTGCAGAAGTTGAGATTGCTCAACCCAAGAAAAGAACCTTTAAG
EST: ACCAGCCGCTGCGTCGAACTCGCACTTGTTTCACTGCATTCTTCACCATG GCGGACGCTGCAGAAGTTGAGATTGCTCAACCCAAGAAAAGAACCTTTAAGEST: gi|162218517|gb|FC395094.1|FC395094
genomic: ACCAGCCGCTGCGTCGAACTCGCACTTGTTTCACTGCATTCTTCACCATGgtactactca ... gcgtatgcagGCGGACGCTGCAGAAGTTGAGATTGCTCAACCCAAGAAAAGAACCTTTAAG
EST: ACCAGCCGCTGCGTCGAACTCGCACTTGTTTCACTGCATTCTTCACCATG GCGGACGCTGCAGAAGTTGAGATTGCTCAACCCAAGAAAAGAACCTTTAAGEST: gi|162261488|gb|FC438324.1|FC438324
genomic: ACCAGCCGCTGCGTCGAACTCGCACTTGTTTCACTGCATTCTTCACCATGgtactactca ... gcgtatgcagGCGGACGCTGCAGAAGTTGAGATTGCTCAACCCAAGAAAAGAACCTTTAAG
EST: ACCAGCCGCTGCGTCGAACTCGCACTTGTTTCACTGCATTCTTCACCATG GCGGACGCTGCAGAAGTTGAGATTGCTCAACCCAAGAAAAGAACCTTTAAGEST: gi|67717312|gb|BJ967571.1|BJ967571
genomic: ACCAGCCGCTGCGTCGAACTCGCACTTGTTTCACTGCATTCTTCACCATGgtactactca ... gcgtatgcagGCGGACGCTGCAGAAGTTGAGATTGCTCAACCCAAGAAAAGAACCTTTAAG
EST: ACCAGCCGCTGCGTCGAACTCGCACTTGTTTCACTGCATTCTTCACCATG GCGGACGCTGCAGAAGTTGAGATTGCTCAACCCAAGAAAAGAACCTTTAAGEST: gi|162264292|gb|FC441394.1|FC441394
genomic: ACCAGCCGCTGCGTCGAACTCGCACTTGTTTCACTGCATTCTTCACCATGgtactactca ... gcgtatgcagGCGGACGCTGCAGAAGTTGAGATTGCTCAACCCAAGAAAAGAACCTTTAAG
EST: CATTCTTC-CCATG GCGGACGCTGCAGAAGTTGAGATTGCTCAACCCAAGAAAAGAACCTTTAAGEST: gi|162227186|gb|FC403843.1|FC403843
genomic: CATTCTTCACCATGgtactactca ... gcgtatgcagGCGGACGCTGCAGAAGTTGAGATTGCTCAACCCAAGAAAAGAACCTTTAAG
EST: CCAGCCGCTGCGTCGAACTCGCACTTGTTTCACTGCATTCTTCACCATG GCGGACGCTGCAGAAGTTGAGATTGCTCAACCCAAGAAAAGAACCTTTAAGEST: gi|162259873|gb|FC436008.1|FC436008
genomic: CCAGCCGCTGCGTCGAACTCGCACTTGTTTCACTGCATTCTTCACCATGgtactactca ... gcgtatgcagGCGGACGCTGCAGAAGTTGAGATTGCTCAACCCAAGAAAAGAACCTTTAAG
EST: ACCAGCCGCTGCGTCGAACTCGCACTTGTTTCACTGCATTCTTCACCATG GCGGACGCTGCAGAAGTTGAGATTGCTCAACCCAAGAAAAGAACCTTTAAGEST: gi|7147889|gb|AW509811.1|AW509811
genomic: ACCAGCCGCTGCGTCGAACTCGCACTTGTTTCACTGCATTCTTCACCATGgtactactca ... gcgtatgcagGCGGACGCTGCAGAAGTTGAGATTGCTCAACCCAAGAAAAGAACCTTTAAG
EST: ACCAGCCGCTGCGTCGAACTCGCACTTGTTTCACTGCATTCTTCACCATG GCGGACGCTGCAGAAGTTGAGATTGCTCAACCCAAGAAAAGAACCTTTAAGEST: gi|67725829|gb|BJ976088.1|BJ976088
genomic: ACCAGCCGCTGCGTCGAACTCGCACTTGTTTCACTGCATTCTTCACCATGgtactactca ... gcgtatgcagGCGGACGCTGCAGAAGTTGAGATTGCTCAACCCAAGAAAAGAACCTTTAAG
EST: ACCAGCCGCTGCGTCGAACTCGCACTTGTTTCACTGCATTCTTCACCATG GCGGACGCTGCAGAAGTTGAGATTGCTCAACCCAAGAAAAGAACCTTTAAG
genomic: ACCAGCCGCTGCGTCGAACTCGCACTTGTTTCACTGCATTCTTCACCATGgtactactca ... gcgtatgcagGCGGACGCTGCAGAAGTTGAGATTGCTCAACCCAAGAAAAGAACCTTTAAG
ctaattccggccacatttggattgaggaaatgagacaatttgtttgcgtatgcagGCGGACGCTGCAGAAGTTGAGATTGCTCAACCCAAGAAAAGAACCTTTAAGAAGTTTACTTTCCGCGGCGTCGATCTCGATGCTCTCCTCGACATGAGCA
acctaat putative branch site (score: 196)
aatttgttt TA-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| gtactactcactttctcctttcctgtcccaaaattatgctttgttattgaatatgtgcgctgcgttgtggtgctggtttgaaccaggactgaaacctaattccggccacatttggattgaggaaatgagacaatttgtttgcgtatgcagGCGGACGCTGCAGAAGTTGAGATTGCTCAACCCAAGAAAAGAACCTTTAAGAAGTTTACTTTCCGCGGCGTCGATCTCGATGCTCTCCTCGACATGAGCA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CTCCTC