1 5' 3' | 2 5' 3' | 3 5' 3' |
...cgtttttccactcgaatcatcacgtgtatttgattctgtatcgtctttgtaaggactagtgtttgggatagtaacttcaaggtgcattgtactgtaatagAGTACAGATTCAAGCGCAAAGTAATCGTCCTCTGCGGCCCTGCCTTGATGTGGGTTGTTTTCTGGAAATGCACTCAGAAGACGGTGTAAGATACTCGCAA
species | Physcomitrella patens |
transcript | PP1S478_13V6.2 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
EST: AAGAGCCTACGTCGTCGTTGGCTGAGAGGTGGATTGCGGTCTTGGTACTG AGTACAGATTCAAGCGCAAAGTAATCGTCCTCTGCGGCCCTGCCTTGATGT
genomic: AAGAGCCTACGTCGTCGTTGGCTGAGAGGTGGATTGCGGTCTTGGTACTGgtgaggtttc ... actgtaatagAGTACAGATTCAAGCGCAAAGTAATCGTCCTCTGCGGCCCTGCCTTGATGT
tttgtaaggactagtgtttgggatagtaacttcaaggtgcattgtactgtaatagAGTACAGATTCAAGCGCAAAGTAATCGTCCTCTGCGGCCCTGCCTTGATGTGGGTTGTTTTCTGGAAATGCACTCAGAAGACGGTGTAAGATACTCGCAA
tagtaac putative branch site (score: 1)
atagtaa TA-rich tract