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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtatccgatctacaatagctgatgcttgtgaataacttgtattgcacaaatggtgctactaattcagAGCGTGTCGACCAAGACGACGTTTCCTGGGAGTTCTGGTTAA

Basic information

species Physcomitrella patens
transcript PP1S46_55V6.1
intron # 1
splice site 3'
intron type U2


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

caatagctgatgcttgtgaataacttgtattgcacaaatggtgctactaattcagAGCGTGTCGACCAAGACGACGTTTCCTGGGAGTTCTGGTTAA
                                            tactaat  putative branch site (score: 1)
                  aataactt  TA-rich tract