Sequence
atgc intronic sequence ATGC exonic sequence...ttcggtcgattccgcatagtttcatcagaggagacgcgcagttggcgatctgcgagctaacttctgagctaaaatctatcagtttactgtttgggtgcagTTTTCCAGTATGTGGCAGCAGCTCATGACGTGGTAACTTTGGGAACCCAAGCAGAGTACGACGGTTGCGATTCAACTACTCCCTTGAACAGAACCCAGAC
Basic information
species | Physcomitrella patens |
transcript | PP1S46_32V6.1 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|18362241|gb|BJ194311.1|BJ194311EST: CGTGTGGGCTCAGAATGTCTCCAGTTATCTTGTTGAAGGCGATGTGATCA TTTTCCAGTATGTGGCAGCAGCTCATGACGTGGTAACTTTGGGAACCCAAG
genomic: CGTGTGGGCTCAGAATGTCTCCAGTTATCTTGTTGAAGGCGATGTGATCAgtaagtccgt ... ttgggtgcagTTTTCCAGTATGTGGCAGCAGCTCATGACGTGGTAACTTTGGGAACCCAAG
atgc intronic sequence ATGC exonic sequenceIntronic sequence truncated to 55 bases.cgatctgcgagctaacttctgagctaaaatctatcagtttactgtttgggtgcagTTTTCCAGTATGTGGCAGCAGCTCATGACGTGGTAACTTTGGGAACCCAAGCAGAGTACGACGGTTGCGATTCAACTACTCCCTTGAACAGAACCCAGAC
taaaatctat TA-rich tract