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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtactctcccacactctctgcgctctgtattcgtgtcttcatgcttgcattgtgtctcccgcgagctctcgttccgtggcctttaggtgtggagctttttatgtgccctggtggaatgtgctgtggctcacatgagttctgattagagtggcggtggttttttgcattgtagTGTCGATCCCTTCTCCAAGAAGGATTGGTATGACATCAAGGCACCCAATACTTTCACTCAAAAGAACTTGGGAAAGACTCTCGTGACCAGGACCGCGGGA

Basic information

species Physcomitrella patens
transcript PP1S46_147V6.1
intron # 1
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: PP1S46_147V6.1 (Physcomitrella patens), 3'ss of exon 1
lower sequence: LOC_Os02g18550.1 (Oryza sativa), 3'ss of exon 1
gtactctcccacactctctgcgctctgtattcgtgtcttcatgcttgcattgtgtctcccgcgagctctcgttccgtggcctttaggtgtggagcttt--ttatgtgccctggtggaatgtgctgtggctcacatgagttctgattagagtggcggtggttttttgcattgtagTGTCGATCCCTTCTCCAAGAAGGATTGGTATGACATCAAGGCACCCAATACTTTCACTCAAAAGAACTTGGGAAAGACTCTCGTGACCAGGACCGCGGGA
                          |||  | ||  | |  ||  ||  ||||    || | | ||||||| |     |  | || ||       ||  ||  |     ||| ||| | || | |||  |   |    | |   |      | |  |||          | || ||||||||||| ||||||||||||||||| ||||||||||| || |     ||| |       ||| | || ||||| |||||  ||||||||  ||| 
--------------------------gtaagc-tgcttgcgcgcgggcggtgtgggcgccac-acctctcgtcct----ctctgagctgcttgttcttgcttggggtttttgggggattctgatttgggacttcttctctttttctctctccgtgtgggt----------gcagCGTCGATCCCTTTTCCAAGAAGGATTGGTACGACATCAAGGCGCCGACCGTGTTCTCCGTCCGCAACATCGGCAAGACCCTCGTCTCCAGGACCCAGGGG

upper sequence: PP1S46_147V6.1 (Physcomitrella patens), 3'ss of exon 1
lower sequence: GRMZM2G013457_T01 (Zea mays), 3'ss of exon 1
gtactctcccacactctctgcgctctgtattcgtgtcttcatgcttgcattgtgtctcccgcgagctctcgttccgtggcctttaggtgtggagctttttatgtgccctggtggaatgtgctgtggctcacatgagttctgat----tagagtggcggtggtt-ttttgcattgtagTGTCGATCCCTTCTCCAAGAAGGATTGGTATGACATCAAGGCACCCAATACTTTCACTCAAAAGAACTTGGGAAAGACTCTCGTGACCAGGACCGCGGGA
                                                            |  || |  | || | ||  |||   ||      |||   || |  |  |||  | ||    ||  ||        | |||||    | | ||| | ||| |  |||||  ||  || |||||||||||||| |||||||| ||||||||||||||||| ||       |||| |      ||| | || |||||||||||| |||||||   ||| 
------------------------------------------------------------gtaagtttgc-ttgcatgttcttcccgtt-----cttcacatctatctcggtcaattgcttcgtttctggagcttctgctgatgcggttgtgtgtctgtgttccttttgtcttacagCGTCGATCCCTTCTCTAAGAAGGACTGGTATGACATCAAGGCCCCATCGGTCTTCAGTGTGCGCAACATTGGGAAGACTCTCGTGTCCAGGACACAGGGT

upper sequence: PP1S46_147V6.1 (Physcomitrella patens), 3'ss of exon 1
lower sequence: GRMZM2G030915_T05 (Zea mays), 3'ss of exon 2
gtactctcccacactctctgcgctctgtattcgtgtcttcatgcttgcattgtgtctcccgcgagctctcgttccgtggcctttaggtgtggagctttttatgtgccctggtggaatgtgctgtggctcacatgagttctgattagagtggcggtggt-tttttgcattgtagTGTCGATCCCTTCTCCAAGAAGGATTGGTATGACATCAAGGCACCCAATACTTTCACTCAAAAGAACTTGGGAAAGACTCTCGTGACCAGGACCGCGGGA------
                                                                                                                                                 | ||||  | | |  || |    || || ||||| || ||||| |||||||||||||||||||||||||||||       |||| |      ||| | || |||||||||||  |||||||   |||       
------------------------------------------------------------------------------------------------------------------------------------------------tgcgtggttgcgttacttcttttatgcagcgtcgaccctttctctaagaaggattggtatgacatcaaggcaccgtcggtgttcagtgtgcgcaacatcgGGAAGACTCTCGTATCCAGGACACAGGGTACCAGG

upper sequence: PP1S46_147V6.1 (Physcomitrella patens), 3'ss of exon 1
lower sequence: GRMZM2G030915_T08 (Zea mays), 3'ss of exon 1
gtactctcccacactctctgcgctctgtattcgtgtcttcatgcttgcattgtgtctcccgcgagctctcgttccgtggcctttaggtgtggagctttttatgtgccctggtggaatgtgctgtggctcacatgagttctgattagagtggcggtggttttttgcattgtagTGTCGATCCCTTCTCCAAGAAGGATTGGTATGACATCAAGGCACCCAATACTTTCACTCAAAAGAACTTGGGAAAGACTCTCGTGACCAGGACCGCGGGA
                                  ||     ||||||| |  | | ||||          ||||    |   |||  || |  | ||  | | |  | |  |        | || ||| |   |  | |        || ||| |  || |||    || || ||||| || ||||| |||||||||||||||||||||||||||||       |||| |      ||| | || |||||||||||  |||||||   ||| 
----------------------------------gttagtttgcttgcctgttatatccca---------gttcttcagatcttacttgggtcgattgctttctttctttat--------ccgttgctgatgcggttgc-----gtggttgcgttacttctttta--tgcagCGTCGACCCTTTCTCTAAGAAGGATTGGTATGACATCAAGGCACCGTCGGTGTTCAGTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGT

upper sequence: PP1S46_147V6.1 (Physcomitrella patens), 3'ss of exon 1
lower sequence: GRMZM2G030915_T04 (Zea mays), 3'ss of exon 1
gtactctcccacactctctgcgctctgtattcgtgtcttcatgcttgcattgtgtctcccgcgagctctc-gttccgtggcctttaggtgtggagctttttatgtgccctggtggaatgtgctgtggctcacatgagttctgattagagtggcggtggttttttgcattgtagTGTCGATCCCTTCTCCAAGAAGGATTGGTATGACATCAAGGCACCCAATACTTTCACTCAAAAGAACTTGGGAAAGACTCTCGTGACCAGGACCGCGGGA
                                                          | |  |  || | ||||    |   |||  || |  | ||  | | |  | |  |        | || ||| |   |  | |        || ||| |  || |||    || || ||||| || ||||| |||||||||||||||||||||||||||||       |||| |      ||| | || |||||||||||  |||||||   ||| 
----------------------------------------------------------ctgttatatcccagttcttcagatcttacttgggtcgattgctttctttctttat--------ccgttgctgatgcggttgc-----gtggttgcgttacttctttta--tgcagCGTCGACCCTTTCTCTAAGAAGGATTGGTATGACATCAAGGCACCGTCGGTGTTCAGTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGT

upper sequence: PP1S46_147V6.1 (Physcomitrella patens), 3'ss of exon 1
lower sequence: GRMZM2G030915_T05 (Zea mays), 3'ss of exon 1
gtactctcccacactctctgcgctctgtattcgtgtcttcatgcttgcattgtgtctcccgcgagctctcgttccgtggcctttaggtgtggagctttttatgtgccctggtggaatgtgctgtggctcacatgagttctgattagagtggcggtggttttttgcattgtagTGTCGATCCCTTCTCCAAGAAGGATTGGTATGACATCAAGGCACCCAATACTTTCACTCAAAAGAACTTGGGAAAGACTCTCGTGACCAGGACCGCGGGA
                                  ||     ||||||| |  | | ||||   || |||       | ||  || |||     ||||| | | |      || |    |||||| |                 |   || ||| |  || |||    || || ||||| || ||||| |||||||||||||||||||||||||||||       |||| |      ||| | ||                            
----------------------------------gttagtttgcttgcctgttatatccc---agttcttcagatctagc--ttgggtcgattgctttctttctttatccgttgctgatgctgttg-----------------tgtggttgcgatacttctttta--tgcagCGTCGACCCTTTCTCTAAGAAGGATTGGTATGACATCAAGGCACCGTCGGTGTTCAGTGTGCGCAACATCGG----------------------------

upper sequence: PP1S46_147V6.1 (Physcomitrella patens), 3'ss of exon 1
lower sequence: GRMZM2G030915_T03 (Zea mays), 3'ss of exon 1
gtactctcccacactctctgcgctctgtattcgtgtcttcatgcttgcattgtgtctcccgcgagctctcgttccgtggcctttaggtgtggagctttttatgtgccctggtggaatgtgctgtggctcacatgagttctgattagagtggcggtggttttttgcattgtagTGTCGATCCCTTCTCCAAGAAGGATTGGTATGACATCAAGGCACCCAATACTTTCACTCAAAAGAACTTGGGAAAGACTCTCGTGACCAGGACCGCGGGA
                                  ||     ||||||| |  | | ||||   || |||       | ||  || |||     ||||| | | |      || |    |||||| |                 |   || ||| |  || |||    || || ||||| || ||||| |||||||||||||||||||||||||||||       |||| |      ||| | || |||||||||||  |||||||   ||| 
----------------------------------gttagtttgcttgcctgttatatccc---agttcttcagatctagc--ttgggtcgattgctttctttctttatccgttgctgatgctgttg-----------------tgtggttgcgatacttctttta--tgcagCGTCGACCCTTTCTCTAAGAAGGATTGGTATGACATCAAGGCACCGTCGGTGTTCAGTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGT

upper sequence: PP1S46_147V6.1 (Physcomitrella patens), 3'ss of exon 1
lower sequence: GRMZM2G145258_T01 (Zea mays), 3'ss of exon 1
gtactctcccacactctctgcgctctgtattcgtgtcttcatgcttgcattgtgtctcccgcgagctctcgttccgtggcctttaggtgtggagctttttatgtgccctggtggaatgtgctgtggctcacatgagttctgattagagtggcggtggttttttgcattgtagTGTCGATCCCTTCTCCAAGAAGGATTGGTATGACATCAAGGCACCCAATACTTTCACTCAAAAGAACTTGGGAAAGACTCTCGTGACCAGGACCGCGGGA
                                  ||     ||||||| |  | | ||||          ||||    |   ||   ||||  | ||  | | |  | |  |        | || ||| |   | ||||||      || ||| |   |  ||    || || ||||| || ||||| |||||||||||||||||||||||||||||       |||| |      ||| | || |||||||||||  |||||||   ||| 
----------------------------------gttagtttgcttgcctgttatatccca---------gttcttcagatcttgcttgtgtcgattgctttttttctttat--------ccgttgctgatgcg-gttctgt----ggttgcgttacatcattta--tgcagCGTCGACCCTTTCTCTAAGAAGGATTGGTATGACATCAAGGCACCGTCGGTGTTCAGTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGT

upper sequence: PP1S46_147V6.1 (Physcomitrella patens), 3'ss of exon 1
lower sequence: GLYMA10G39050.1 (Glycine max), 3'ss of exon 1
gtactctcccacactctctgcgctctgtattcgtgtcttcatgcttgcattgtgtctcccgcgagctctcgttccgtggcctttaggtgtggagctttttatgtgccctggtggaatgtgctgtggctcacatgagttctgattagagtggcggtggttttttgcattgtagTGTCGATCCCTTCTCCAAGAAGGATTGGTATGACATCAAGGCACCCAATACTTTCACTCAAAAGAACTTGGGAAAGACTCTCGTGACCAGGACCGCGGGA
                                                               | ||  | || | |  ||  |       |   | ||| |||    || |  ||  | |        |       | || || | |||    ||           || || |  ||||||||  |||||||||||||||||||||| ||||| ||   |  |||       || ||  | || || || |||||  |  | ||   ||| 
---------------------------------------------------------gttagtatcttccatttcttttccccttttctctgttttatttgtgt-ttttgctttaacattcaaaattcaatgacgtgtttggtttgtgtgtgaatg-----------tgcagAGCTGATCCCTTTGCCAAGAAGGATTGGTATGACATTAAGGCTCCTTCTGTTTTTCAAGTGAAAAATGTTGGCAAAACCCTCGTCTCTCGTACTCAGGGT

upper sequence: PP1S46_147V6.1 (Physcomitrella patens), 3'ss of exon 1
lower sequence: GLYMA20G28780.3 (Glycine max), 3'ss of exon 1
gtactctcccacactctctgcgctctgtattcgtgtcttcatgcttgcattgtgtctcccgcgagctctcgttccgtggcctttaggtgtggagctttttatgtgccctggtggaatgtgctgtggctcacatgagttctgattagagtggcggtggttttttgcat-tgtagTGTCGATCCCTTCTCCAAGAAGGATTGGTATGACATCAAGGCACCCAATACTTTCACTCAAAAGAACTTGGGAAAGACTCTCGTGACCAGGACCGCGGGA-
                                                 | || ||| |||     |    ||||    ||||||    |   | ||  | ||||   |       || | | |   |||    |  |    |     ||  |||  || | || || || || |  ||||||||  |||||||||||||||||||||| ||||| ||   |  |||       || ||  | || || || |||||  |  | || || ||  
-----------------------------------------------gttagtatcttccgt----ttctattcc----ccttta----ttctgtttcatttgtgtttt-------tgcgttatcattca----aaattcagtggttttgttggtttttgtatgaatgtgcagAGCTGATCCCTTTGCCAAGAAGGATTGGTATGACATTAAGGCCCCTTCTCTTTTTCAAGTGAAAAATGTTGGCAAAACCCTCGTCTCTCGTAC-GCAGGGT

upper sequence: PP1S46_147V6.1 (Physcomitrella patens), 3'ss of exon 1
lower sequence: AT4G34670.1 (Arabidopsis thaliana), 3'ss of exon 2
gtactctcccacactctctgcgctctgtattcgtgtcttcatgcttgcattgtgtctcccgcgagctctcgttccgtggcctttaggtgtggagctttttatgtgccctggtggaatgtgctgtggctcacatgagttctgattagagtggcggtggtt------ttttgcat--tgtagTGTCGATCCCTTCTCCAAGAAGGATTGGTATGACATCAAGGCACCCAATACTTTCACTCAAAAGAACTTGGGAAAGACTCTCGTGACCAGGACCGCGGGA
                                                                                        ||  ||     ||||| ||    |  |||   | |      |  ||   ||||  || ||||   ||| ||      || || ||  || ||||| |||||||||||||||||||||||||||||| | ||||| ||   | |||||||  | | |||  | || |||||||| ||  |||||||   ||| 
----------------------------------------------------------------------------------------gta-agtaacctatgt-cctgaataaaattctcagatttctaattgtaatctgtatatagtgttcgtgattgaattgttatggatggtgcagTGTTGATCCCTTCTCCAAGAAGGATTGGTATGACGTGAAGGCTCCTGGTTCTTTCACGAACAGGAATGTTGGGAAGACTCTTGTTTCCAGGACTCAGGGT

upper sequence: PP1S46_147V6.1 (Physcomitrella patens), 3'ss of exon 1
lower sequence: EDP08964 (Chlamydomonas reinhardtii), 3'ss of exon 1
gtactctcccacactctctgcgctctgtattcgtgtcttcatgcttgcattgtgtctcccgcgagctctcgttccgtggcctttaggtgtggagctttttatgtgccctggtggaatgtgctgtggctcacatgagttctgattagagtggcggtggttttttgcattgtagTGTCGATCCCTTCTCCAAGAAGGATTGGTATGACATCAAGGCACCCAATACTTTCACTCAAAAGAACTTGGGAAAGACTCTCGTGACCAGGACCGCGGGA-
                                                                                                      ||     ||     | |||    ||   |   |  ||    |    ||||  | ||||| |||   | ||    || |||||| |||||||||| ||||||||||||||||| ||||  |  ||||||      ||| |||| ||||| || ||||||||||| || ||  
------------------------------------------------------------------------------------------------------gtaagtcggccatctctgcgcccgcgacccccacctc--gctcacctggc--tcgttttctgcgc-gcagCTCGGACCCCTTCGCCAAGAAGGACTGGTATGACATCAAGGCGCCCACCATGTTCACTGTCCGCAACGTGGGCAAGACCCTGGTGACCAGGAC-GCAGGGT

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|208356487|gb|DC914335.1|DC914335
EST:     GGGAAGAACAAGCGCATTTCCAAGGGGAAGAAGGGAGGCAAGAAGAAAAT                         TGTCGATCCCTTCTCCAAGAAGGATTGGTATGACATCAAGGCACCCAATAC
genomic: GGGAAGAACAAGCGCATTTCCAAGGGGAAGAAGGGAGGCAAGAAGAAAATgtactctccc ... tgcattgtagTGTCGATCCCTTCTCCAAGAAGGATTGGTATGACATCAAGGCACCCAATAC
EST: gi|208387007|gb|DC941641.1|DC941641
EST:     GGGAAGAACAAGCGCATTTCCAAGGGGAAGAAGGGAGGCAAGAAGAAAAT                         TGTCGATCCCTTCTCCAAGAAGGATTGGTATGACATCAAGGCACCCAATAC
genomic: GGGAAGAACAAGCGCATTTCCAAGGGGAAGAAGGGAGGCAAGAAGAAAATgtactctccc ... tgcattgtagTGTCGATCCCTTCTCCAAGAAGGATTGGTATGACATCAAGGCACCCAATAC
EST: gi|18328426|gb|BJ160431.1|BJ160431
EST:     GGGAAGAACAAGCGCATTTCCAAGGGGAAGAAGGGAGGCAAGAAGAAAAT                         TGTCGATCCCTTCTCCAAGAAGGATTGGTATGACATCAAGGCACCCAATAC
genomic: GGGAAGAACAAGCGCATTTCCAAGGGGAAGAAGGGAGGCAAGAAGAAAATgtactctccc ... tgcattgtagTGTCGATCCCTTCTCCAAGAAGGATTGGTATGACATCAAGGCACCCAATAC
EST: gi|208359722|gb|DC930298.1|DC930298
EST:     GGGAAGAACAAGCGCATTTCCAAGGGGAAGAAGGGAGGCAAGAAGAAAAT                         TGTCGATCCCTTCTCCAAGAAGGATTGGTATGACATCAAGGCACCCAATAC
genomic: GGGAAGAACAAGCGCATTTCCAAGGGGAAGAAGGGAGGCAAGAAGAAAATgtactctccc ... tgcattgtagTGTCGATCCCTTCTCCAAGAAGGATTGGTATGACATCAAGGCACCCAATAC
EST: gi|18367195|gb|BJ199276.1|BJ199276
EST:     GGGAAGAACAAGCGCATTTCCAAGGGGAAGAAGGGAGGCAAGAAGAAAAT                         TGTCGATCCCTTCTCCAAGAAGGATTGGTATGACATCAAGGCACCCAATAC
genomic: GGGAAGAACAAGCGCATTTCCAAGGGGAAGAAGGGAGGCAAGAAGAAAATgtactctccc ... tgcattgtagTGTCGATCCCTTCTCCAAGAAGGATTGGTATGACATCAAGGCACCCAATAC
EST: gi|18351958|gb|BJ184010.1|BJ184010
EST:     GGGAAGAACAAGCGCATTTCCAAGGGGAAGAAGGGAGGCAAGAAGAAAAT                         TGTCGATCCCTTCTCCAAGAAGGATTGGTATGACATCAAGGCACCCAATAC
genomic: GGGAAGAACAAGCGCATTTCCAAGGGGAAGAAGGGAGGCAAGAAGAAAATgtactctccc ... tgcattgtagTGTCGATCCCTTCTCCAAGAAGGATTGGTATGACATCAAGGCACCCAATAC
EST: gi|208376111|gb|DC910991.1|DC910991
EST:     GGGAAGAACAAGCGCATTTCCAAGGGGAAGAAGGGAGGCAAGAAGAAAAT                         TGTCGATCCCTTCTCCAAGAAGGATTGGTATGACATCAAGGCACCCAATAC
genomic: GGGAAGAACAAGCGCATTTCCAAGGGGAAGAAGGGAGGCAAGAAGAAAATgtactctccc ... tgcattgtagTGTCGATCCCTTCTCCAAGAAGGATTGGTATGACATCAAGGCACCCAATAC
EST: gi|208350321|gb|DC906023.1|DC906023
EST:     GGGAAGAACAAGCGCATTTCCAAGGGGAAGAAGGGAGGCAAGAAGAAAAT                         TGTCGATCCCTTCTCCAAGAAGGATTGGTATGACATCAAGGCACCCAATAC
genomic: GGGAAGAACAAGCGCATTTCCAAGGGGAAGAAGGGAGGCAAGAAGAAAATgtactctccc ... tgcattgtagTGTCGATCCCTTCTCCAAGAAGGATTGGTATGACATCAAGGCACCCAATAC
EST: gi|18348096|gb|BJ180143.1|BJ180143
EST:     GGGAAGAACAAGCGCATTTCCAAGGGGAAGAAGGGAGGCAAGAAGAAAAT                         TGTCGATCCCTTCTCCAAGAAGGATTGGTATGACATCAAGGCACCCAATAC
genomic: GGGAAGAACAAGCGCATTTCCAAGGGGAAGAAGGGAGGCAAGAAGAAAATgtactctccc ... tgcattgtagTGTCGATCCCTTCTCCAAGAAGGATTGGTATGACATCAAGGCACCCAATAC

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 1 RNA-Seqlibrary.


Block sizes: 33 (upstream exon), 29 (downstream exon)
Score: 22

GCTTCTGCTGCTGCTGTTGCTGGAATTCCTCTTTGGCAGCCATGGCCGTGGGGAAGAACAAGCGCATTTCCAAGGGGAAGAAGGGAGGCAAGAAGAAAATgtactctccc ... tgcattgtagTGTCGATCCCTTCTCCAAGAAGGATTGGTATGACATCAAGGCACCCAATACTTTCACTCAAAAGAACTTGGGAAAGACTCTCGTGACCAGGACCGCGGGA




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 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

gtgctgtggctcacatgagttctgattagagtggcggtggttttttgcattgtagTGTCGATCCCTTCTCCAAGAAGGATTGGTATGACATCAAGGCACCCAATACTTTCACTCAAAAGAACTTGGGAAAGACTCTCGTGACCAGGACCGCGGGA
                   ttctgat  putative branch site (score: 22)
                                        ttttttgc  putative PPT
                                        tttttt  TA-rich tract
















Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
gtactctcccacactctctgcgctctgtattcgtgtcttcatgcttgcattgtgtctcccgcgagctctcgttccgtggcctttaggtgtggagctttttatgtgccctggtggaatgtgctgtggctcacatgagttctgattagagtggcggtggttttttgcattgtagTGTCGATCCCTTCTCCAAGAAGGATTGGTATGACATCAAGGCACCCAATACTTTCACTCAAAAGAACTTGGGAAAGACTCTCGTGACCAGGACCGCGGGA

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAAGAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  AAGAAC