1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
gtgtgtgtgtagccattgttccccgctcatttttgccaatgggttgggatttttttgcttattattctgttttttcatgagcagTTCGTAGCGGATGGAGTCTTCTTTGCGGAGCTGAACGAGCTTCTCACCCGGGAGCTTGCTGAAGATGGGTACTCTGGCGTGGAAGTGCGCGTCACTCCCA
species | Physcomitrella patens |
transcript | PP1S454_3V6.1 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
EST: CTCGTCATTTCGACGCCACCATGGCCACTCAAATGAGCAAGAAACGAAAG TTCGTAGCGGATGGAGTCTTCTTTGCGGAGCTGAACGAGCTTCTCACCCGGEST: gi|18349939|gb|BJ181990.1|BJ181990
genomic: CTCGTCATTTCGACGCCACCATGGCCACTCAAATGAGCAAGAAACGAAAGgtgtgtgtgt ... tcatgagcagTTCGTAGCGGATGGAGTCTTCTTTGCGGAGCTGAACGAGCTTCTCACCCGG
EST: CTCGTCATTTCGACGCCACCATGGCCACTCAAATGAGCAAGAAACGAAAG TTCGTAGCGGATGGAGTCTTCTTTGCGGAGCTGAACGAGCTTCTCACCCGGEST: gi|18364872|gb|BJ196945.1|BJ196945
genomic: CTCGTCATTTCGACGCCACCATGGCCACTCAAATGAGCAAGAAACGAAAGgtgtgtgtgt ... tcatgagcagTTCGTAGCGGATGGAGTCTTCTTTGCGGAGCTGAACGAGCTTCTCACCCGG
EST: CTCGTCATTTCGACGCCACCATGGCCACTCAAATGAGCAAGAAACGAAAG TTCGTAGCGGATGGAGTCTTCTTTGCGGAGCTGAACGAGCTTCTCACCCGGEST: gi|18361517|gb|BJ193583.1|BJ193583
genomic: CTCGTCATTTCGACGCCACCATGGCCACTCAAATGAGCAAGAAACGAAAGgtgtgtgtgt ... tcatgagcagTTCGTAGCGGATGGAGTCTTCTTTGCGGAGCTGAACGAGCTTCTCACCCGG
EST: CTCGTCATTTCGACGCCACCATGGCCACTCAAATGAGCAAGAAACGAAAG TTCGTAGCGGATGGAGTCTTCTTTGCGGAGCTGAACGAGCTTCTCACCCGGEST: gi|18355674|gb|BJ187733.1|BJ187733
genomic: CTCGTCATTTCGACGCCACCATGGCCACTCAAATGAGCAAGAAACGAAAGgtgtgtgtgt ... tcatgagcagTTCGTAGCGGATGGAGTCTTCTTTGCGGAGCTGAACGAGCTTCTCACCCGG
EST: CTCGTCATTTCGACGCCACCATGGCCACTCAAATGAGCAAGAAACGAAAG TTCGTAGCGGATGGAGTCTTCTTTGCGGAGCTGAACGAGCTTCTCACCCGGEST: gi|162239612|gb|FC416868.1|FC416868
genomic: CTCGTCATTTCGACGCCACCATGGCCACTCAAATGAGCAAGAAACGAAAGgtgtgtgtgt ... tcatgagcagTTCGTAGCGGATGGAGTCTTCTTTGCGGAGCTGAACGAGCTTCTCACCCGG
EST: CTCGTCATTTCGACGCCACCATGGCCACTCAAATGAGCAAGAAACGAAAG TTCGTAGCGGATGGAGTCTTCTTTGCGGAGCTGAACGAGCTTCTCACCCGGEST: gi|67703308|gb|BJ963541.1|BJ963541
genomic: CTCGTCATTTCGACGCCACCATGGCCACTCAAATGAGCAAGAAACGAAAGgtgtgtgtgt ... tcatgagcagTTCGTAGCGGATGGAGTCTTCTTTGCGGAGCTGAACGAGCTTCTCACCCGG
EST: CTCGTCATTTCGACGCCACCATGGCCACTCAAATGAGCAAGAAACGAAAG TTCGTAGCGGATGGAGTCTTCTTTGCGGAGCTGAACGAGCTTCTCACCCGGEST: gi|19790024|gb|BQ041654.1|BQ041654
genomic: CTCGTCATTTCGACGCCACCATGGCCACTCAAATGAGCAAGAAACGAAAGgtgtgtgtgt ... tcatgagcagTTCGTAGCGGATGGAGTCTTCTTTGCGGAGCTGAACGAGCTTCTCACCCGG
EST: CTCGTCATTTCGACGCCACCATGGCCACTCAAATGAGCAAGAAACGAAAG TTCGTAGCGGATGGAGTCTTCTTTGCGGAGCTGAACGAGCTTCTCACCCGGEST: gi|67704629|gb|BJ964862.1|BJ964862
genomic: CTCGTCATTTCGACGCCACCATGGCCACTCAAATGAGCAAGAAACGAAAGgtgtgtgtgt ... tcatgagcagTTCGTAGCGGATGGAGTCTTCTTTGCGGAGCTGAACGAGCTTCTCACCCGG
EST: TTTCGACGCCACCATGGCCACTCAAATGAGCAAGAAACGAAAG TTCGTAGCGGATGGAGTCTTCTTTGCGGGGCTGAACGAGCTTCTCACCCGGEST: gi|18328399|gb|BJ160404.1|BJ160404
genomic: TTTCGACGCCACCATGGCCACTCAAATGAGCAAGAAACGAAAGgtgtgtgtgt ... tcatgagcagTTCGTAGCGGATGGAGTCTTCTTTGCGGAGCTGAACGAGCTTCTCACCCGG
EST: CTCGTCATTTCGACGCCACCATGGCCACTCAAATGAGCAAGAAACGAAAG TTCGTAGCGGATGGAGTCTTCTTTGCGGAGCTGAACGAGCTTCTCACCCGGEST: gi|18348535|gb|BJ180584.1|BJ180584
genomic: CTCGTCATTTCGACGCCACCATGGCCACTCAAATGAGCAAGAAACGAAAGgtgtgtgtgt ... tcatgagcagTTCGTAGCGGATGGAGTCTTCTTTGCGGAGCTGAACGAGCTTCTCACCCGG
EST: CTCGTCATTTCGACGCCACCATGGCCACTCAAATGAGCAAGAAACGAAAG TTCGTAGCGGATGGAGTCTTCTTTGCGGAGCTGAACGAGCTTCTCACCCGGEST: gi|18362282|gb|BJ194352.1|BJ194352
genomic: CTCGTCATTTCGACGCCACCATGGCCACTCAAATGAGCAAGAAACGAAAGgtgtgtgtgt ... tcatgagcagTTCGTAGCGGATGGAGTCTTCTTTGCGGAGCTGAACGAGCTTCTCACCCGG
EST: CTCGTCATTTCGACGCCACCATGGCCACTCAAATGAGCAAGAAACGAAAG TTCGTAGCGGATGGAGTCTTCTTTGCGGAGCTGAACGAGCTTCTCACCCGGEST: gi|18366022|gb|BJ198100.1|BJ198100
genomic: CTCGTCATTTCGACGCCACCATGGCCACTCAAATGAGCAAGAAACGAAAGgtgtgtgtgt ... tcatgagcagTTCGTAGCGGATGGAGTCTTCTTTGCGGAGCTGAACGAGCTTCTCACCCGG
EST: CTCGTCATTTCGACGCCACCATGGCCACTCAAATGAGCAAGAAACGAAAG TTCGTAGCGGATGGAGTCTTCTTTGCGGAGCTGAACGAGCTTCTCACCCGGEST: gi|67703786|gb|BJ964019.1|BJ964019
genomic: CTCGTCATTTCGACGCCACCATGGCCACTCAAATGAGCAAGAAACGAAAGgtgtgtgtgt ... tcatgagcagTTCGTAGCGGATGGAGTCTTCTTTGCGGAGCTGAACGAGCTTCTCACCCGG
EST: CTCGTCATTTCGACGCCACCATGGCCACTCAAATGAGCAAGAAACGAAAG TTCGTAGCGGATGGAGTCTTCTTTGCGGAGCTGAACGAGCTTCTCACCCGGEST: gi|18346604|gb|BJ178649.1|BJ178649
genomic: CTCGTCATTTCGACGCCACCATGGCCACTCAAATGAGCAAGAAACGAAAGgtgtgtgtgt ... tcatgagcagTTCGTAGCGGATGGAGTCTTCTTTGCGGAGCTGAACGAGCTTCTCACCCGG
EST: CTCGTCATTTCGACGCCACCATGGCCACTCAAATGAGCAAGAAACGAAAG TTCGTAGCGGATGGAGTCTTCTTTGCGGAGCTGAACGAGCTTCTCACCCGGEST: gi|18362603|gb|BJ194674.1|BJ194674
genomic: CTCGTCATTTCGACGCCACCATGGCCACTCAAATGAGCAAGAAACGAAAGgtgtgtgtgt ... tcatgagcagTTCGTAGCGGATGGAGTCTTCTTTGCGGAGCTGAACGAGCTTCTCACCCGG
EST: CTCGTCATTTCGACGCCACCATGGCCACTCAAATGAGCAAGAAACGAAAG TTCGTAGCGGATGGAGTCTTCTTTGCGGAGCTGAACGAGCTTCTCACCCGGEST: gi|18361780|gb|BJ193847.1|BJ193847
genomic: CTCGTCATTTCGACGCCACCATGGCCACTCAAATGAGCAAGAAACGAAAGgtgtgtgtgt ... tcatgagcagTTCGTAGCGGATGGAGTCTTCTTTGCGGAGCTGAACGAGCTTCTCACCCGG
EST: CTCGTCATTTCGACGCCACCATGGCCACTCAAATGAGCAAGAAACGAAAG TTCGTAGCGGATGGAGTCTTCTTTGCGGAGCTGAACGAGCTTCTCACCCGGEST: gi|18366162|gb|BJ198240.1|BJ198240
genomic: CTCGTCATTTCGACGCCACCATGGCCACTCAAATGAGCAAGAAACGAAAGgtgtgtgtgt ... tcatgagcagTTCGTAGCGGATGGAGTCTTCTTTGCGGAGCTGAACGAGCTTCTCACCCGG
EST: CTCGTCATTTCGACGCCACCATGGCCACTCAAATGAGCAAGAAACGAAAG TTCGTAGCGGATGGAGTCTTCTTTGTGGAGCTGAACGAGCTTCTCACCCGGEST: gi|18363366|gb|BJ195438.1|BJ195438
genomic: CTCGTCATTTCGACGCCACCATGGCCACTCAAATGAGCAAGAAACGAAAGgtgtgtgtgt ... tcatgagcagTTCGTAGCGGATGGAGTCTTCTTTGCGGAGCTGAACGAGCTTCTCACCCGG
EST: CTCGTCATTTCGACGCCACCATGGCCACTCAAATGAGCAAGAAACGAAAG TTCGTAGCGGATGGAGTCTTCTTTGTGGAGCTGAACGAGCTTCTCACCCGGEST: gi|18368961|gb|BJ201046.1|BJ201046
genomic: CTCGTCATTTCGACGCCACCATGGCCACTCAAATGAGCAAGAAACGAAAGgtgtgtgtgt ... tcatgagcagTTCGTAGCGGATGGAGTCTTCTTTGCGGAGCTGAACGAGCTTCTCACCCGG
EST: CTCGTCATTTCGACGCCACCATGGCCACTCAAATGAGCAAGAAACGAAAG TTCGTAGCGGATGGAGTCTTCTTTGCGGAGCTGAACGANCTTCTCACCCGGEST: gi|18331691|gb|BJ163702.1|BJ163702
genomic: CTCGTCATTTCGACGCCACCATGGCCACTCAAATGAGCAAGAAACGAAAGgtgtgtgtgt ... tcatgagcagTTCGTAGCGGATGGAGTCTTCTTTGCGGAGCTGAACGAGCTTCTCACCCGG
EST: CTCGTCATTTCGACGCCACCATGGCCACTCAAATGAGCAAGAAACGAAAG TTCGTAGCGGATGGAGTCTTCTTTGCGGAGCTGAACGAGCTTCTCACCCGGEST: gi|162245549|gb|FC424103.1|FC424103
genomic: CTCGTCATTTCGACGCCACCATGGCCACTCAAATGAGCAAGAAACGAAAGgtgtgtgtgt ... tcatgagcagTTCGTAGCGGATGGAGTCTTCTTTGCGGAGCTGAACGAGCTTCTCACCCGG
EST: CTCGTCATTTCGACGCCACCATGGCCACTCAAATGAGCAAGAAACGAAAG TTCGTAGCGGATGGAGTCTTCTTTGCGGAGCTGAACGAGCTTCTCACCCGGEST: gi|162267185|gb|FC442597.1|FC442597
genomic: CTCGTCATTTCGACGCCACCATGGCCACTCAAATGAGCAAGAAACGAAAGgtgtgtgtgt ... tcatgagcagTTCGTAGCGGATGGAGTCTTCTTTGCGGAGCTGAACGAGCTTCTCACCCGG
EST: CTCGTCATTTCGACGCCACCATGGCCACTCAAATGAGCAAGAAACGAAAG TTCGTAGCGGATGGAGTCTTCTTTGCGGAGCTGAACGAGCTTCTCACCCGGEST: gi|162230385|gb|FC406949.1|FC406949
genomic: CTCGTCATTTCGACGCCACCATGGCCACTCAAATGAGCAAGAAACGAAAGgtgtgtgtgt ... tcatgagcagTTCGTAGCGGATGGAGTCTTCTTTGCGGAGCTGAACGAGCTTCTCACCCGG
EST: CTCGTCATTTCGACGCCACCATGGCCACTCAAATGAGCAAGAAACGAAAG TTCGTAGCGGATGGAGTCTTCTTTGCGGAGCTGAACGAGCTTCTCACCCGGEST: gi|67698406|gb|BJ958639.1|BJ958639
genomic: CTCGTCATTTCGACGCCACCATGGCCACTCAAATGAGCAAGAAACGAAAGgtgtgtgtgt ... tcatgagcagTTCGTAGCGGATGGAGTCTTCTTTGCGGAGCTGAACGAGCTTCTCACCCGG
EST: CTCGTCATTTCGACGCCACCATGGCCACTCAAATGAGCAAGAAACGAAAG TTCGTAGCGGATGGAGTCTTCTTTGCGGAGCTGAACGAGCTTCTCACCCGGEST: gi|18330053|gb|BJ162059.1|BJ162059
genomic: CTCGTCATTTCGACGCCACCATGGCCACTCAAATGAGCAAGAAACGAAAGgtgtgtgtgt ... tcatgagcagTTCGTAGCGGATGGAGTCTTCTTTGCGGAGCTGAACGAGCTTCTCACCCGG
EST: C-C-TCATTTCGACGCCACCATGGCCACTCAAATGAGCAAGAAACGAAAG TTCGTAGCGGATGGAGTCTTCTTTGCGGAGCTGAACGAGCTTCTCACCCGGEST: gi|18326908|gb|BJ158908.1|BJ158908
genomic: CTCGTCATTTCGACGCCACCATGGCCACTCAAATGAGCAAGAAACGAAAGgtgtgtgtgt ... tcatgagcagTTCGTAGCGGATGGAGTCTTCTTTGCGGAGCTGAACGAGCTTCTCACCCGG
EST: CTCGTCATTTCGACGCCACCACGGCCACTCAAATGAGCAAGAAACGAAAG TTCGTAGCGGATGGAGTCTTCTTTGCGGAGCTGAACGAGCTTCTCACCCGGEST: gi|162274011|gb|FC450358.1|FC450358
genomic: CTCGTCATTTCGACGCCACCATGGCCACTCAAATGAGCAAGAAACGAAAGgtgtgtgtgt ... tcatgagcagTTCGTAGCGGATGGAGTCTTCTTTGCGGAGCTGAACGAGCTTCTCACCCGG
EST: CTCGTCATTTCGACGCCACCATGGCCACTCAAATGAGCAAGAAACGAAAG TTCGTAGCGGATGGAGTCTTCTTTGCGGAGCTGAACGAGCTTCTCACCCGGEST: gi|208393090|gb|DC929585.1|DC929585
genomic: CTCGTCATTTCGACGCCACCATGGCCACTCAAATGAGCAAGAAACGAAAGgtgtgtgtgt ... tcatgagcagTTCGTAGCGGATGGAGTCTTCTTTGCGGAGCTGAACGAGCTTCTCACCCGG
EST: CTCGTCATTTCGACGCCACCATGGCCACTCAAATGAGCAAGAAACGAAAG TTCGTAGCGGATGGAGTCTTCTTTGCGGAGCTGAACGAGCTTCTCACCCGGEST: gi|67574976|gb|BJ947800.1|BJ947800
genomic: CTCGTCATTTCGACGCCACCATGGCCACTCAAATGAGCAAGAAACGAAAGgtgtgtgtgt ... tcatgagcagTTCGTAGCGGATGGAGTCTTCTTTGCGGAGCTGAACGAGCTTCTCACCCGG
EST: CTCGTCATTTCGACGCCACCATGGCCACTCAAATGAGCAAGAAACGAAAG TTCGTAGCGGATGGAGTCTTCTTTGCGGAGCTGAACGAGCTTCTCACCCGGEST: gi|18325037|gb|BJ157033.1|BJ157033
genomic: CTCGTCATTTCGACGCCACCATGGCCACTCAAATGAGCAAGAAACGAAAGgtgtgtgtgt ... tcatgagcagTTCGTAGCGGATGGAGTCTTCTTTGCGGAGCTGAACGAGCTTCTCACCCGG
EST: CTCGTCATTTCGACGCCACCATGGCCACTCAAATGAGCAAGAAACGAAAG TTCGTAGCGGATGGAGTCTTCTTTGCGGAGCTGAACGAGCTTCTCACCCGGEST: gi|100399202|gb|BY954251.1|BY954251
genomic: CTCGTCATTTCGACGCCACCATGGCCACTCAAATGAGCAAGAAACGAAAGgtgtgtgtgt ... tcatgagcagTTCGTAGCGGATGGAGTCTTCTTTGCGGAGCTGAACGAGCTTCTCACCCGG
EST: CTCGTCATTTCGACGCCACCATGGCCACTCAAATGAGCAAGAAACGAAAG TTCGTAGCGGATGGAGTCTTCTTTGCGGAGCTGAACGAGCTTCTCACCCGGEST: gi|100400230|gb|BY954373.1|BY954373
genomic: CTCGTCATTTCGACGCCACCATGGCCACTCAAATGAGCAAGAAACGAAAGgtgtgtgtgt ... tcatgagcagTTCGTAGCGGATGGAGTCTTCTTTGCGGAGCTGAACGAGCTTCTCACCCGG
EST: CTCGTCATTTCGACGCCACCATGGCCACTCAAATGAGCAAGAAACGAAAG TTCGTAGCGGATGGAGTCTTCTTTGCGGAGCTGAACGAGCTTCTCACCCGGEST: gi|18350200|gb|BJ182251.1|BJ182251
genomic: CTCGTCATTTCGACGCCACCATGGCCACTCAAATGAGCAAGAAACGAAAGgtgtgtgtgt ... tcatgagcagTTCGTAGCGGATGGAGTCTTCTTTGCGGAGCTGAACGAGCTTCTCACCCGG
EST: CTCGTCATTTCGACGCCACCATGGCCACTCAAATGAGCAAGAAACGAAAG TTCGTAGCGGATGGAGTCTTCTTTGCGGAGCTGAACGAGCTTCTCACCCGGEST: gi|162242773|gb|FC416412.1|FC416412
genomic: CTCGTCATTTCGACGCCACCATGGCCACTCAAATGAGCAAGAAACGAAAGgtgtgtgtgt ... tcatgagcagTTCGTAGCGGATGGAGTCTTCTTTGCGGAGCTGAACGAGCTTCTCACCCGG
EST: CTCGTCATTTCGACGCCACCATGGCCACTCAAATGAGCAAGAAACGAAAG TTCGTAGCGGATGGAGTCTTCTTTGCGGAGCTGAACGAGCTTCTCACCCGGEST: gi|162209056|gb|FC385608.1|FC385608
genomic: CTCGTCATTTCGACGCCACCATGGCCACTCAAATGAGCAAGAAACGAAAGgtgtgtgtgt ... tcatgagcagTTCGTAGCGGATGGAGTCTTCTTTGCGGAGCTGAACGAGCTTCTCACCCGG
EST: CTCGTCATTTCGACGCCACCATGGCCACTCAAATGAGCAAGAAACGAAAG TTCGTAGCGGATGGAGTCTTCTTTGCGGAGCTGAACGAGCTTCTCACCCGGEST: gi|162247731|gb|FC423389.1|FC423389
genomic: CTCGTCATTTCGACGCCACCATGGCCACTCAAATGAGCAAGAAACGAAAGgtgtgtgtgt ... tcatgagcagTTCGTAGCGGATGGAGTCTTCTTTGCGGAGCTGAACGAGCTTCTCACCCGG
EST: CTCGTCATTTCGACGCCACCATGGCCACTCAAATGAGCAAGAAACGAAAG TTCGTAGCGGATGGAGTCTTCTTTGCGGAGCTGAACGAGCTTCTCACCCGGEST: gi|100370712|gb|BY948478.1|BY948478
genomic: CTCGTCATTTCGACGCCACCATGGCCACTCAAATGAGCAAGAAACGAAAGgtgtgtgtgt ... tcatgagcagTTCGTAGCGGATGGAGTCTTCTTTGCGGAGCTGAACGAGCTTCTCACCCGG
EST: CTCGTCATTTCGACGCCACCATGGCCACTCAAATGAGCAAGAAACGAAAG TTCGTAGCGGATGGAGTCTTCTTTGCGGAGCTGAACGAGCTTCTCACCCGGEST: gi|18350797|gb|BJ182848.1|BJ182848
genomic: CTCGTCATTTCGACGCCACCATGGCCACTCAAATGAGCAAGAAACGAAAGgtgtgtgtgt ... tcatgagcagTTCGTAGCGGATGGAGTCTTCTTTGCGGAGCTGAACGAGCTTCTCACCCGG
EST: CTCGTCATTTCGACGCCACCATGGCCACTCAAATGAGCAAGAAACGAAAG TTCGTAGCGGATGGAGTCTTCTTTGCGGAGCTGAACGAGCTTCTCACCCGGEST: gi|18343042|gb|BJ175079.1|BJ175079
genomic: CTCGTCATTTCGACGCCACCATGGCCACTCAAATGAGCAAGAAACGAAAGgtgtgtgtgt ... tcatgagcagTTCGTAGCGGATGGAGTCTTCTTTGCGGAGCTGAACGAGCTTCTCACCCGG
EST: CTCGTCATTTCGACGCCACCATGGCCACTCAAATGAGCAAGAAACGAAAG TTCGTAGCGGATGGAGTCTTCTTTGCGGAGCTGAACGAGCTTCTCACCCGGEST: gi|162221282|gb|FC398092.1|FC398092
genomic: CTCGTCATTTCGACGCCACCATGGCCACTCAAATGAGCAAGAAACGAAAGgtgtgtgtgt ... tcatgagcagTTCGTAGCGGATGGAGTCTTCTTTGCGGAGCTGAACGAGCTTCTCACCCGG
EST: AATGAGCAAGAAACGAAAG TTCGTAGCGGATGGAGTCTTCTTTGCGGAGCTGAACGAGCTTCTCACCCGGEST: gi|18329924|gb|BJ161930.1|BJ161930
genomic: AATGAGCAAGAAACGAAAGgtgtgtgtgt ... tcatgagcagTTCGTAGCGGATGGAGTCTTCTTTGCGGAGCTGAACGAGCTTCTCACCCGG
EST: CTCGTCATTTCGACGCCACCATGGCCACTCAAATGAGCAAGAAACGAAAG TTCGTAGCGGATGGAGTCTTCTTTGCGGAGCTGAACGAGCTTCTCACCCGGEST: gi|18355633|gb|BJ187692.1|BJ187692
genomic: CTCGTCATTTCGACGCCACCATGGCCACTCAAATGAGCAAGAAACGAAAGgtgtgtgtgt ... tcatgagcagTTCGTAGCGGATGGAGTCTTCTTTGCGGAGCTGAACGAGCTTCTCACCCGG
EST: CTCGTCATTTCGACGCCACCATGGCCACTCAAATGAGCAAGAAACGAAAG TTCGTAGCGGATGGAGTCTTCTTTGCGGAGCTGAACGAGCTTCTCACCCGG
genomic: CTCGTCATTTCGACGCCACCATGGCCACTCAAATGAGCAAGAAACGAAAGgtgtgtgtgt ... tcatgagcagTTCGTAGCGGATGGAGTCTTCTTTGCGGAGCTGAACGAGCTTCTCACCCGG
tttttgccaatgggttgggatttttttgcttattattctgttttttcatgagcagTTCGTAGCGGATGGAGTCTTCTTTGCGGAGCTGAACGAGCTTCTCACCCGGGAGCTTGCTGAAGATGGGTACTCTGGCGTGGAAGTGCGCGTCACTCCCA
tttttttgcttattat CT-rich tract
atttttttgcttatta TA-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| gtgtgtgtgtagccattgttccccgctcatttttgccaatgggttgggatttttttgcttattattctgttttttcatgagcagTTCGTAGCGGATGGAGTCTTCTTTGCGGAGCTGAACGAGCTTCTCACCCGGGAGCTTGCTGAAGATGGGTACTCTGGCGTGGAAGTGCGCGTCACTCCCA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGCTT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CTGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGATG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAAG