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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

...gagccacgaggagaagtattctgagacgttaagacatgtgcccgatggtttttcgttcaagcaatttgatccttgcagaacgtgttgattgtctttacagATAAGTGAAGTGCTGTCACGATGTTCAAAGCCTACAGGGTTGGTGGCACTGCTTTTGCCACTGAGCGGTCGTTCCGTCTGGTGCCTCTTGTTGTAGCTGT

Basic information

species Physcomitrella patens
transcript PP1S43_170V6.4
intron # 1
splice site 3'
intron type U2


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

tggtttttcgttcaagcaatttgatccttgcagaacgtgttgattgtctttacagATAAGTGAAGTGCTGTCACGATGTTCAAAGCCTACAGGGTTGGTGGCACTGCTTTTGCCACTGAGCGGTCGTTCCGTCTGGTGCCTCTTGTTGTAGCTGT
                                     tgttgat  putative branch site (score: 4)
                                           ttgtcttt  CT-rich tract
                 aatttgat  TA-rich tract