1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' |
...aattgtctcattatctggttgtctcaattgtgacgctatcatcttaattgtaatcttgacttttttttttttttttttttttttttcctggtttgtgcagGGTTTCGTGTTGGAGGTTTTTATCTAGAAATTTTGATCAGTCGGGGAACCAGTTGAGTGTAAAATTTCACTCGAACGAACAGTGTAGCATCGTCGATTTT
species | Physcomitrella patens |
transcript | PP1S41_172V6.1 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
EST: CTACTCACGCACCATCGCTCAATCACACTGTCTTTCCTTCACCAATTTCG GGTTTCGTGTTGGAGGTTTTTATCTAGAAATTTTGATCAGTCGGGGAACCAEST: gi|162272513|gb|FC447684.1|FC447684
genomic: CTACTCACGCACCATCGCTCAATCACACTGTCTTTCCTTCACCAATTTCGgtacatcctt ... gtttgtgcagGGTTTCGTGTTGGAGGTTTTTATCTAGAAATTTTGATCAGTCGGGGAACCA
EST: CTACTCACGCACCATCGCTCAATCACACTGTCTTTCCTTCACCAATTTCG GGTTTCGTGTTGGAGGTTTTTATCTAGAAATTTTGATCAGTCGGGGAACCAEST: gi|208397812|gb|DC912021.1|DC912021
genomic: CTACTCACGCACCATCGCTCAATCACACTGTCTTTCCTTCACCAATTTCGgtacatcctt ... gtttgtgcagGGTTTCGTGTTGGAGGTTTTTATCTAGAAATTTTGATCAGTCGGGGAACCA
EST: CTACTCACGCACCATCGCTCAATCACACTGTCTTTCCTTCACCAATTTCG GGTTTCGTGTTGGAGGTTTTTATCTAGAAATTTTGATCAGTCGGGGAACCA
genomic: CTACTCACGCACCATCGCTCAATCACACTGTCTTTCCTTCACCAATTTCGgtacatcctt ... gtttgtgcagGGTTTCGTGTTGGAGGTTTTTATCTAGAAATTTTGATCAGTCGGGGAACCA
aattgtaatcttgacttttttttttttttttttttttttttcctggtttgtgcagGGTTTCGTGTTGGAGGTTTTTATCTAGAAATTTTGATCAGTCGGGGAACCAGTTGAGTGTAAAATTTCACTCGAACGAACAGTGTAGCATCGTCGATTTT
tcttgac putative branch site (score: 3)
tcttgacttttttttt CT-rich tract
taatcttgactttttt TA-rich tract